RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 PDE1BQ01064 536 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 ACY1Q03154 408 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 XRCC4Q13426 336 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 CHRNA6Q15825 494 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 RPE65Q16518 533 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 DNTTIP2Q5QJE6 756 aaKnown RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 ZDHHC20Q5W0Z9 365 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 PWWP2BQ6NUJ5 590 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 BZW1Q7L1Q6 419 aaKnown RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 GLT6D1Q7Z4J2 308 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 VSIG1Q86XK7 387 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 GPR150Q8NGU9 434 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 BLOC1S5Q8TDH9 187 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 TFB1MQ8WVM0 346 aaKnown RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 MIB2Q96AX9 1013 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 TADA1Q96BN2 335 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 TEKT5Q96M29 485 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 RAB33BQ9H082 229 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 IL26Q9NPH9 171 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 KLHL8Q9P2G9 620 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 FAM153AQ9UHL3 310 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 DOPEY2Q9Y3R5 2298 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 GLYATL1P3A0A0U1RQE8 302 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 TTLL8A6PVC2 850 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 GPR39O43194 453 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 BUD23O43709 281 aaKnown RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 SPOPO43791 374 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A9O60656 530 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 VPS4BO75351 444 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A6P19224 532 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 NFKB1P19838 968 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A1P22309 533 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A4P22310 534 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 AKT1P31749 480 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 HNRNPH3P31942 346 aaKnown RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 HMGCLP35914 325 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 WNT3AP56704 352 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 RPS15P62841 145 aaKnown RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 NFE2L1Q14494 772 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 LLGL1Q15334 1064 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 SIRPB2Q5JXA9 342 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 LDLRAP1Q5SW96 308 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 FNBP1LQ5T0N5 605 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 KAZNQ674X7 775 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 ARMC6Q6NXE6 501 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 FAM199XQ6PEV8 388 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 TMEM220Q6QAJ8 160 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 FAM83HQ6ZRV2 1179 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 DET1Q7L5Y6 550 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 RHOT2Q8IXI1 618 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 EFCAB3Q8N7B9 438 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 RASGEF1AQ8N9B8 481 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 IPMKQ8NFU5 416 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 OR8K1Q8NGG5 319 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 SEC14L1Q92503 715 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 SLC41A2Q96JW4 573 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 ZNF514Q96K75 400 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 MAP3K3Q99759 626 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 FGF21Q9NSA1 209 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 SPTLC3Q9NUV7 552 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 SAE1Q9UBE0 346 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 VPS4AQ9UN37 437 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 HYOU1Q9Y4L1 999 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 PCDHGA6Q9Y5G7 932 aa12.71□□□□□ -0.37
SF3B3-202ENST00000562722 CFAP20Q9Y6A4 193 aaKnown RBP12.71□□□□□ -0.37
SF3B3-202ENST00000562722 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
SF3B3-202ENST00000562722 BLACEA4D250 179 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 CPNE3O75131 537 aaKnown RBP12.7□□□□□ -0.38
SF3B3-202ENST00000562722 SCRG1O75711 98 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 TPM1P09493 284 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 MTHFD1P11586 935 aaKnown RBP12.7□□□□□ -0.38
SF3B3-202ENST00000562722 MSH3P20585 1137 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 CHRNA4P43681 627 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 NR2C2P49116 596 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 PGDP52209 483 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 CTSCP53634 463 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 HSD11B2P80365 405 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 ITGA9Q13797 1035 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 TFDP2Q14188 446 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 KRT33BQ14525 404 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 PRKD1Q15139 912 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-202ENST00000562722 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 GPRC6AQ5T6X5 926 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 CERS6Q6ZMG9 384 aa12.7□□□□□ -0.38
SF3B3-202ENST00000562722 BPHLQ86WA6 291 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms