RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF669Q96BR6 464 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 BCL7BQ9BQE9 202 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 C2orf49Q9BVC5 232 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 DUSP16Q9BY84 665 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 LRRC4Q9HBW1 653 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 CMTM6Q9NX76 183 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 DNMT3LQ9UJW3 386 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NR5A2O00482 541 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 AP3D1O14617 1153 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 SOAT2O75908 522 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 BMP1P13497 986 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 HSD17B1P14061 328 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 TCF3P15923 654 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NPR3P17342 541 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 AVPR1AP37288 418 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ALDH3A2P51648 485 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 TKTL1P51854 596 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 PXDC1Q5TGL8 231 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM219BQ5XKK7 198 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM205BPQ63HN1 556 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 TUBA3EQ6PEY2 450 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 STK32CQ86UX6 486 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 AFAP1L2Q8N4X5 818 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ST6GAL2Q96JF0 529 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ELMO2Q96JJ3 720 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF300Q96RE9 604 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 LGMNQ99538 433 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 C11orf84Q9BUA3 381 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 BDH2Q9BUT1 245 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 SMOC2Q9H3U7 446 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 TOR3AQ9H497 397 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 MAP10Q9P2G4 905 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 FBXO5Q9UKT4 447 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 Q9Y3F1 56 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 TRPV2Q9Y5S1 764 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 M0QYT0 321 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 MDM4O15151 490 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 IGHA2P01877 340 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 CCDC159P0C7I6 412 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 YWHAQP27348 245 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 BRCC3P46736 316 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 KCNA10Q16322 511 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NXNL2Q5VZ03 156 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 HEATR6Q6AI08 1181 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ADAMTSL2Q86TH1 951 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 FUNDC1Q8IVP5 155 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NLGN4XQ8N0W4 816 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 STYXQ8WUJ0 223 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 PCED1BQ96HM7 432 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NAT9Q9BTE0 207 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 TRMT13Q9NUP7 481 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ABI2Q9NYB9 513 aaPredicted RBP13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NPAP1Q9NZP6 1156 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 XPR1Q9UBH6 696 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ABCD2Q9UBJ2 740 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 PADI3Q9ULW8 664 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 NUP205Q92621 2012 aa13.88□□□□□ -0.19
GTF3C1-203ENST00000562609 ATP6AP2A0A1C7CYW4 349 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 AGAP5A6NIR3 686 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 ATP6AP2O75787 350 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 CD47Q08722 323 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 DAG1Q14118 895 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF598Q86UK7 904 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 TTC9Q92623 222 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 RNF145Q96MT1 663 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 C6orf62Q9GZU0 229 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 FAM124BQ9H5Z6 455 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 FBRSL1Q9HCM7 1045 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 WBP11Q9Y2W2 641 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 YJEFN3A6XGL0 299 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 C9JVG2 144 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 APOA1P02647 267 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 ALPLP05186 524 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 USP17L7P0C7H9 530 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 CHRM3P20309 590 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 MATKP42679 507 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 MAP2K4P45985 399 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 SNX16P57768 344 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 OLIG2Q13516 323 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 DPYSL2Q16555 572 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 VPS26BQ4G0F5 336 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 YIF1BQ5BJH7 314 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 OTUD1Q5VV17 481 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 UBQLNLQ8IYU4 475 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 COLGALT1Q8NBJ5 622 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 ELMO1Q92556 727 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 EDEM1Q92611 657 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 CENPIQ92674 756 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 PMEPA1Q969W9 287 aa13.87□□□□□ -0.19
GTF3C1-203ENST00000562609 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms