RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PARD6AQ9NPB6 346 aa14.58□□□□□ -0.08
SNRPA1-207ENST00000559309 KLHL42Q9P2K6 505 aa14.58□□□□□ -0.08
SNRPA1-207ENST00000559309 SLC23A2Q9UGH3 650 aa14.58□□□□□ -0.08
SNRPA1-207ENST00000559309 PCOLCE2Q9UKZ9 415 aa14.58□□□□□ -0.08
SNRPA1-207ENST00000559309 CDYLQ9Y232 598 aa14.58□□□□□ -0.08
SNRPA1-207ENST00000559309 A6NCN8 305 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 H3BMM5 538 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 PFDN6O15212 129 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 GPC4O75487 556 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 PIAS2O75928 621 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 SHBGP04278 402 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 PMLP29590 882 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 AKT1P31749 480 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 BLKP51451 505 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 CLCN7P51798 805 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 LIMK2P53671 638 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 C21orf59P57076 290 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 ZKSCAN8Q15776 578 aaPredicted RBP14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 KLHL38Q2WGJ6 581 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 HLA-BQ31612 363 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 GRTP1Q5TC63 336 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 ADGRD1Q6QNK2 874 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 STRA8Q7Z7C7 330 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 ACVR1CQ8NER5 493 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 OR2L2Q8NH16 312 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 SAP25Q8TEE9 199 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 NAT14Q8WUY8 206 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 OR2M4Q96R27 311 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 GPR22Q99680 433 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 SMOC1Q9H4F8 434 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 CARS2Q9HA77 564 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 CYP4F12Q9HCS2 524 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 PPANQ9NQ55 473 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 TM7SF3Q9NS93 570 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 DNAAF2Q9NVR5 837 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 GMEB2Q9UKD1 530 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 CRYL1Q9Y2S2 319 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 CSNK1G3Q9Y6M4 447 aa14.57□□□□□ -0.08
SNRPA1-207ENST00000559309 SPTBN2O15020 2390 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 SLC5A10A0PJK1 596 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 MGAT4DA6NG13 374 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 OR2AG2A6NM03 316 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 CDX4O14627 284 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 KHNYNO15037 678 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 YKT6O15498 198 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 FAM155BO75949 473 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 ASMTLO95671 621 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 TNFP01375 233 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 SYPP08247 313 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 OR56A5P0C7T3 313 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 ENGP17813 658 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 FDXRP22570 491 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 AOAHP28039 575 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 EPHA8P29322 1005 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 MAGEA12P43365 314 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 HNRNPKP61978 463 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 ARHGAP8P85298 464 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 GTF2H3Q13889 308 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 RBM20Q5T481 1227 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 METRNLQ641Q3 311 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 TCEAL6Q6IPX3 200 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 DOK6Q6PKX4 331 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 WASH2PQ6VEQ5 465 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 C17orf82Q86X59 251 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 GALNT13Q8IUC8 556 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 RASGRP3Q8IV61 690 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 KIAA2013Q8IYS2 634 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 SLC25A45Q8N413 288 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 BEND7Q8N7W2 519 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 MZB1Q8WU39 189 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 TCEAL3Q969E4 200 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 DCUN1D1Q96GG9 259 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 VPS39Q96JC1 886 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 PAFAH2Q99487 392 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 CCM2Q9BSQ5 444 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 NUSAP1Q9BXS6 441 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 TMEM168Q9H0V1 697 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 PPCSQ9HAB8 311 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 WASH6PQ9NQA3 447 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 FSCN3Q9NQT6 498 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 SEMA4GQ9NTN9 838 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 DLL3Q9NYJ7 618 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 GALPQ9UBC7 116 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 SLC24A2Q9UI40 661 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 GNPTGQ9UJJ9 305 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 PLEKHM1Q9Y4G2 1056 aa14.56□□□□□ -0.08
SNRPA1-207ENST00000559309 COL5A1P20908 1838 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 PCDHGA12O60330 932 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 NIPSNAP2O75323 286 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 ERLIN1O75477 346 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 POP7O75817 140 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 CFIP05156 583 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 JUNDP17535 347 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 FMO4P31512 558 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 CCR7P32248 378 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 GNPDA1P46926 289 aa14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 EIF3BP55884 814 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-207ENST00000559309 CTBSQ01459 385 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms