RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TAAR2Q9P1P5 351 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 SIRPGQ9P1W8 387 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 DNAJC16Q9Y2G8 782 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 CRYL1Q9Y2S2 319 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 CSNK1G3Q9Y6M4 447 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 PTPRBP23467 1997 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 SPTBN4Q9H254 2564 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 TCRBV9S1A1TA0A576 114 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 EIF3HO15372 352 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM1-217ENST00000559108 FLRT2O43155 660 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 HAUS5O94927 633 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 CTSEP14091 401 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 OGNP20774 298 aaKnown RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 ACTR1BP42025 376 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 BLKP51451 505 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 ACTR1AP61163 376 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 VSNL1P62760 191 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 SLC14A1Q13336 389 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 FRG1Q14331 258 aaKnown RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM1-217ENST00000559108 SEPT7Q16181 437 aaKnown RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 KYNUQ16719 465 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 ERCC6LQ2NKX8 1250 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 RBM20Q5T481 1227 aaKnown RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 TEDDM1Q5T9Z0 273 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 TAF8Q7Z7C8 310 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 C17orf82Q86X59 251 aaPredicted RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 VRK3Q8IV63 474 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 FSTL5Q8N475 847 aaPredicted RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 C2CD4AQ8NCU7 369 aaPredicted RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 GSDMBQ8TAX9 411 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 SETD7Q8WTS6 366 aaKnown RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 FAM136AQ96C01 138 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 LINC00615Q96LM1 132 aaPredicted RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 APOLD1Q96LR9 279 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 TIMM29Q9BSF4 260 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 PHACTR1Q9C0D0 580 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 CDC42EP4Q9H3Q1 356 aaKnown RBP10.71□□□□□ -0.69
TPM1-217ENST00000559108 NLGN3Q9NZ94 848 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 FBXO5Q9UKT4 447 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 CDYLQ9Y232 598 aa10.71□□□□□ -0.69
TPM1-217ENST00000559108 TRBV23OR9-2A0A075B6M9 112 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 SPAARA0A1B0GVQ0 90 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 DCDC2BA2VCK2 349 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 B4DGG1 531 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 GPR89AB7ZAQ6 455 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 KMOO15229 486 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 YKT6O15498 198 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 FOXD2O60548 495 aaPredicted RBP10.7□□□□□ -0.7
TPM1-217ENST00000559108 TTC4O95801 387 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 GPR89BP0CG08 455 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 PAMP19021 973 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 RPS3P23396 243 aaKnown RBP eCLIP10.7□□□□□ -0.7
TPM1-217ENST00000559108 RPL10P27635 214 aaKnown RBP10.7□□□□□ -0.7
TPM1-217ENST00000559108 PDHA2P29803 388 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 CCR7P32248 378 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 NSG1P42857 185 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 GRK6P43250 576 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 PREPP48147 710 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 EIF3BP55884 814 aaKnown RBP10.7□□□□□ -0.7
TPM1-217ENST00000559108 CLDN6P56747 220 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 ARHGAP8P85298 464 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 DMPKQ09013 629 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 CLCA4Q14CN2 919 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 INSCQ1MX18 579 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 PERM1Q5SV97 790 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 DUS1LQ6P1R4 473 aaKnown RBP10.7□□□□□ -0.7
TPM1-217ENST00000559108 GUSBP11Q6P575 273 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 OGFOD3Q6PK18 319 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 CERS6Q6ZMG9 384 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 SLCO6A1Q86UG4 719 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 RELL1Q8IUW5 271 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 OTUD6BQ8N6M0 293 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 FAM46DQ8NEK8 389 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 GPR156Q8NFN8 814 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 RHBDD1Q8TEB9 315 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 PYROXD1Q8WU10 500 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 RMDN2Q96LZ7 410 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 FMO2Q99518 471 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 NDNQ99608 321 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 NAT9Q9BTE0 207 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 GSDMCQ9BYG8 508 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 COG4Q9H9E3 785 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 ZNF624Q9P2J8 865 aaPredicted RBP10.7□□□□□ -0.7
TPM1-217ENST00000559108 PSMD13Q9UNM6 376 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 GPR34Q9UPC5 381 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 CNOT1A5YKK6 2376 aaKnown RBP10.7□□□□□ -0.7
TPM1-217ENST00000559108 ADAMTS20P59510 1910 aa10.7□□□□□ -0.7
TPM1-217ENST00000559108 UBA6A0AVT1 1052 aaPredicted RBP10.69□□□□□ -0.7
TPM1-217ENST00000559108 MGAT4DA6NG13 374 aa10.69□□□□□ -0.7
TPM1-217ENST00000559108 FAM159BA6NKW6 160 aa10.69□□□□□ -0.7
TPM1-217ENST00000559108 OR52A4PA6NMU1 304 aa10.69□□□□□ -0.7
TPM1-217ENST00000559108 PRMT5O14744 637 aaPredicted RBP10.69□□□□□ -0.7
TPM1-217ENST00000559108 TPP1O14773 563 aa10.69□□□□□ -0.7
TPM1-217ENST00000559108 SNX2O60749 519 aa10.69□□□□□ -0.7
TPM1-217ENST00000559108 FAM155BO75949 473 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms