RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 MID2Q9UJV3 735 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PRDM4Q9UKN5 801 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 FAM50BQ9Y247 325 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 MYOFQ9NZM1 2061 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 CEP290O15078 2479 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 REV3LO60673 3130 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 SZT2Q5T011 3432 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 TBC1D3BA6NDS4 549 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 C16orf96A6NNT2 1141 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 A8MT66 165 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 UPK3BL1B0FP48 263 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 TMEM114B3SHH9 223 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 UPK3BL2E5RIL1 263 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 PRMT5O14744 637 aaPredicted RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 H2AFYO75367 372 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 ECI2O75521 394 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 KIAA0754O94854 1291 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ESR1P03372 595 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 RBP1P09455 135 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 MTHFD2P13995 350 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ALOX15P16050 662 aaPredicted RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 GM2AP17900 193 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 PSMC3P17980 439 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ITGALP20701 1170 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 RPS3P23396 243 aaKnown RBP eCLIP7.29□□□□□ -1.24
SPG11-204ENST00000557866 ACRV1P26436 265 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 GDI1P31150 447 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 NNMTP40261 264 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 IL12RB1P42701 662 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 CLCN7P51798 805 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 AQP5P55064 265 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ST8SIA6P61647 398 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 B4GALNT1Q00973 533 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 CCDC15Q0P6D6 951 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 BNIP1Q12981 228 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 TUBB3Q13509 450 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 RCN2Q14257 317 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ZNF234Q14588 700 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ATP13A5Q4VNC0 1218 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 FNDC3BQ53EP0 1204 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 ARL13AQ5H913 290 aaPredicted RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 AARS2Q5JTZ9 985 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 CES5AQ6NT32 575 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 XKR5Q6UX68 686 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 CERS6Q6ZMG9 384 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 RPS27LQ71UM5 84 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 DPPA4Q7L190 304 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 PARS2Q7L3T8 475 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 MTDHQ86UE4 582 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 NXPE1Q8N323 547 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 CPA6Q8N4T0 437 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 PAF1Q8N7H5 531 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ZNF781Q8N8C0 355 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 KDM1BQ8NB78 822 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 CD200R1Q8TD46 325 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 HCAR2Q8TDS4 363 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 KCNJ9Q92806 393 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 SKA1Q96BD8 255 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 TMEM237Q96Q45 408 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ATOH8Q96SQ7 321 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ACOX2Q99424 681 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 EBF4Q9BQW3 602 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 OSBPL1AQ9BXW6 950 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 DERL2Q9GZP9 239 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 TTYH1Q9H313 450 aaPredicted RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 TFB2MQ9H5Q4 396 aaKnown RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 CYP4F12Q9HCS2 524 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 TNFRSF12AQ9NP84 129 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ZDHHC4Q9NPG8 344 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 CLDND1Q9NY35 253 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 KCNK4Q9NYG8 393 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 THAP10Q9P2Z0 257 aaPredicted RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 HEY2Q9UBP5 337 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 ZDHHC2Q9UIJ5 367 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 MBD1Q9UIS9 605 aaPredicted RBP7.29□□□□□ -1.24
SPG11-204ENST00000557866 HAO1Q9UJM8 370 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 APPL1Q9UKG1 709 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 PPM1HQ9ULR3 514 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 SLC12A4Q9UP95 1085 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 MTCH2Q9Y6C9 303 aa7.29□□□□□ -1.24
SPG11-204ENST00000557866 IGLV3-16A0A075B6K0 115 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 EDDM13A0A1B0GTR0 161 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 LRRC14BA6NHZ5 514 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 UBXN8O00124 270 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 CDC7O00311 574 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 PLK4O00444 970 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 NPHS1O60500 1241 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 IPO13O94829 963 aaKnown RBP7.28□□□□□ -1.24
SPG11-204ENST00000557866 T-ENOLP0DO92 83 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 CYP2A6P11509 494 aaPredicted RBP7.28□□□□□ -1.24
SPG11-204ENST00000557866 ITGB6P18564 788 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 SERPINB3P29508 390 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 MMP12P39900 470 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 MTHFRP42898 656 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 SOX9P48436 509 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 KPNA2P52292 529 aaKnown RBP7.28□□□□□ -1.24
SPG11-204ENST00000557866 NCALDP61601 193 aa7.28□□□□□ -1.24
SPG11-204ENST00000557866 POLR2LP62875 67 aaKnown RBP7.28□□□□□ -1.24
SPG11-204ENST00000557866 HTR4Q13639 388 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms