RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 PPM1DO15297 605 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 INPP4BO15327 924 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 RAD1O60671 282 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 GAS8O95995 478 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 AGTP01019 485 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 SLC4A1P02730 911 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 PYGLP06737 847 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 MAP4P27816 1152 aaKnown RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 CASRP41180 1078 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 SPINT3P49223 89 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 PPM1FP49593 454 aaPredicted RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 ARSDP51689 593 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 LRP8Q14114 963 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 UBAP2LQ14157 1087 aaKnown RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 SPARCL1Q14515 664 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 CCDC70Q6NSX1 233 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 MARK2Q7KZI7 788 aaKnown RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 NLRP8Q86W28 1048 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 PTRH1Q86Y79 214 aaKnown RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 OR10G6Q8NH81 332 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 PATE1Q8WXA2 126 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 LRRC45Q96CN5 670 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 SCARF2Q96GP6 870 aaPredicted RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 SLC45A3Q96JT2 553 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 OR2M4Q96R27 311 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 SLC38A3Q99624 504 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 ZPBPQ9BS86 351 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 EIF2B3Q9NR50 452 aaKnown RBP16.4■□□□□ 0.22
NEK9-211ENST00000557673 PKD2L2Q9NZM6 624 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 PDP2Q9P2J9 529 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 PCYOX1Q9UHG3 505 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 ST14Q9Y5Y6 855 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 FLNCQ14315 2725 aa16.4■□□□□ 0.22
NEK9-211ENST00000557673 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 EFCAB7A8K855 629 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 DUX1O43812 170 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 SUN1O94901 812 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 KRT14P02533 472 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 FASLGP48023 281 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 VPS41P49754 854 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 MC1RQ01726 317 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 TRIP13Q15645 432 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 DENND5AQ6IQ26 1287 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 WDR74Q6RFH5 385 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 ZNF572Q7Z3I7 529 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 NLGN4XQ8N0W4 816 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 NLGN4YQ8NFZ3 816 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 C9orf43Q8TAL5 461 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 CCHCR1Q8TD31 782 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 ZNF592Q92610 1267 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 PMEPA1Q969W9 287 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 EID2BQ96D98 161 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 COX14Q96I36 57 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 RUNDC3BQ96NL0 473 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 SRPK1Q96SB4 655 aaKnown RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 TRIT1Q9H3H1 467 aaKnown RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 STN1Q9H668 368 aaKnown RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 GPN2Q9H9Y4 310 aaPredicted RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 ARNT2Q9HBZ2 717 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 HACD3Q9P035 362 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 ANKMY1Q9P2S6 941 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 CDC23Q9UJX2 597 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 PILRAQ9UKJ1 303 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 SHOC2Q9UQ13 582 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 PLEKHM1Q9Y4G2 1056 aa16.39■□□□□ 0.21
NEK9-211ENST00000557673 OAS3Q9Y6K5 1087 aaKnown RBP16.39■□□□□ 0.21
NEK9-211ENST00000557673 FADS2P1A8MWK0 482 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 E7EVH7 732 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 PSMD3O43242 534 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 APRTP07741 180 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 MPSTP25325 297 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 CSF2RBP32927 897 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 BASP1P80723 227 aaKnown RBP16.38■□□□□ 0.21
NEK9-211ENST00000557673 GPS1Q13098 491 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 HENMT1Q5T8I9 393 aaKnown RBP16.38■□□□□ 0.21
NEK9-211ENST00000557673 ALS2CLQ60I27 953 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 CEACAM20Q6UY09 585 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 KLHL7Q8IXQ5 586 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 RAVER1Q8IY67 606 aaKnown RBP16.38■□□□□ 0.21
NEK9-211ENST00000557673 TTC30BQ8N4P2 665 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 BLOC1S5Q8TDH9 187 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 SH3KBP1Q96B97 665 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 EPN3Q9H201 632 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 FAM83DQ9H4H8 585 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 TRABDQ9H4I3 376 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 ZFYVE1Q9HBF4 777 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 OCIAD1Q9NX40 245 aa16.38■□□□□ 0.21
NEK9-211ENST00000557673 NFKBIL1Q9UBC1 381 aaPredicted RBP16.38■□□□□ 0.21
NEK9-211ENST00000557673 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
NEK9-211ENST00000557673 CNOT6Q9ULM6 557 aaKnown RBP16.38■□□□□ 0.21
NEK9-211ENST00000557673 DOPEY2Q9Y3R5 2298 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 AURKAO14965 403 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 URI1O94763 535 aaPredicted RBP16.37■□□□□ 0.21
NEK9-211ENST00000557673 ASMTLO95671 621 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 PTGIRP43119 386 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 MAGEA6P43360 314 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 FOXK1P85037 733 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 MC2RQ01718 297 aa16.37■□□□□ 0.21
NEK9-211ENST00000557673 CKAP4Q07065 602 aaKnown RBP16.37■□□□□ 0.21
NEK9-211ENST00000557673 C2orf54Q08AI8 447 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms