RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 SLC38A9Q8NBW4 561 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 VPS35Q96QK1 796 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 HAUS4Q9H6D7 363 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 MYO1AQ9UBC5 1043 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 TCFL5Q9UL49 500 aa17.94■□□□□ 0.46
ABCD4-228ENST00000557588 LRRC53A6NM62 1247 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 DDX3XO00571 662 aaKnown RBP eCLIP17.93■□□□□ 0.463e-9■■■■□ 23.7
ABCD4-228ENST00000557588 CDK14O94921 469 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 POU3F2P20265 443 aaPredicted RBP17.93■□□□□ 0.46
ABCD4-228ENST00000557588 ITGA1P56199 1179 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 DMPKQ09013 629 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 CCDC122Q5T0U0 273 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 TMC3Q7Z5M5 1100 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 DSELQ8IZU8 1212 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 SLC34A3Q8N130 599 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 CARFQ8N187 725 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 TTC13Q8NBP0 860 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 TRIB3Q96RU7 358 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 NLNQ9BYT8 704 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 KCND1Q9NSA2 647 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 ASF1BQ9NVP2 202 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 C5AR2Q9P296 337 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 TRIM10Q9UDY6 481 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 ZNF711Q9Y462 761 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 POLEQ07864 2286 aa17.93■□□□□ 0.46
ABCD4-228ENST00000557588 APCP25054 2843 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 OR5K3A6NET4 321 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 ZNF185O15231 689 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 KLK3P07288 261 aaPredicted RBP17.92■□□□□ 0.46
ABCD4-228ENST00000557588 RORAP35398 523 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 PRKCIP41743 596 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 ARSEP51690 589 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 RRADP55042 308 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 RIPPLY3P57055 190 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 DPYSL3Q14195 570 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 GPR19Q15760 415 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 ASIC2Q16515 512 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 PLEKHS1Q5SXH7 462 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 CCDC183Q5T5S1 534 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 VWA5B1Q5TIE3 1220 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 E4F1Q66K89 784 aaPredicted RBP17.92■□□□□ 0.46
ABCD4-228ENST00000557588 FAM198BQ6UWH4 519 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 TRAPPC5Q8IUR0 188 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 SRRM1Q8IYB3 904 aaKnown RBP17.92■□□□□ 0.46
ABCD4-228ENST00000557588 MAGEE1Q9HCI5 957 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 TMPRSS11EQ9UL52 423 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 SHOC2Q9UQ13 582 aa17.92■□□□□ 0.46
ABCD4-228ENST00000557588 CSMD2Q7Z408 3487 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 UBA6A0AVT1 1052 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-228ENST00000557588 ANKUB1A6NFN9 424 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 A6NL46 340 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 MEN1O00255 615 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 KCNJ13O60928 360 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 ZBTB11O95625 1053 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-228ENST00000557588 SLC4A1P02730 911 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 CAPN1P07384 714 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 BPIP17213 487 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 MYL5Q02045 173 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 PLCL1Q15111 1095 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 RPE65Q16518 533 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 PLEKHN1Q494U1 663 aaPredicted RBP17.91■□□□□ 0.46
ABCD4-228ENST00000557588 LCN10Q6JVE6 187 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 ZBTB2Q8N680 514 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 CPT1BQ92523 772 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 HDAC11Q96DB2 347 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 PHF12Q96QT6 1004 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 ZNF670Q9BS34 389 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 ISCUQ9H1K1 167 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 BTRCQ9Y297 605 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 B3GNT3Q9Y2A9 372 aa17.91■□□□□ 0.46
ABCD4-228ENST00000557588 CROCCQ5TZA2 2017 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 PIRTP0C851 137 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 MX2P20592 715 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 ABRQ12979 859 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 ATP1A4Q13733 1029 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 FAM69BQ5VUD6 431 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 OOSP2Q86WS3 158 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 LRRN4Q8WUT4 740 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 RANBP9Q96S59 729 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 BARD1Q99728 777 aaKnown RBP17.9■□□□□ 0.46
ABCD4-228ENST00000557588 XPO4Q9C0E2 1151 aaKnown RBP17.9■□□□□ 0.46
ABCD4-228ENST00000557588 AIPL1Q9NZN9 384 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 IP6K2Q9UHH9 426 aa17.9■□□□□ 0.46
ABCD4-228ENST00000557588 MTHFD1P11586 935 aaKnown RBP17.89■□□□□ 0.45
ABCD4-228ENST00000557588 IFI35P80217 286 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-228ENST00000557588 GBE1Q04446 702 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 TMEM115Q12893 351 aaPredicted RBP17.89■□□□□ 0.45
ABCD4-228ENST00000557588 GTF2H3Q13889 308 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 NCF4Q15080 339 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 ATP13A5Q4VNC0 1218 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 TMTC4Q5T4D3 741 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 AMZ2Q86W34 360 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 CISD2Q8N5K1 135 aaKnown RBP17.89■□□□□ 0.45
ABCD4-228ENST00000557588 CNTD1Q8N815 330 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 BTBD6Q96KE9 485 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 GPR63Q9BZJ6 419 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 HSD3B7Q9H2F3 369 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 PCMTD2Q9NV79 361 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 HRASLS2Q9NWW9 162 aa17.89■□□□□ 0.45
ABCD4-228ENST00000557588 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms