RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 NUF2Q9BZD4 464 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 TKTL2Q9H0I9 626 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 CNTD2Q9H8S5 307 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ARNT2Q9HBZ2 717 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 ZBTB26Q9HCK0 441 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SPAG4Q9NPE6 437 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 IARS2Q9NSE4 1012 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 CLIC5Q9NZA1 410 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 CLEC1BQ9P126 229 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 TUBGCP4Q9UGJ1 667 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 PTBP2Q9UKA9 531 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 SLC39A10Q9ULF5 831 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 RIMKLBQ9ULI2 386 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 NDUFAF1Q9Y375 327 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 IPPQ9Y573 584 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 COMMD10Q9Y6G5 202 aa6.09□□□□□ -1.43
CPSF2-205ENST00000556622 LAMA2P24043 3122 aaKnown RBP6.09□□□□□ -1.43
CPSF2-205ENST00000556622 LOC100653049A0A140TA62 436 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 NT5C1B-RDH14C9J2C7 533 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 G3V2L1 256 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 AIM2O14862 343 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 UBDO15205 165 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 HNRNPRO43390 633 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CLASP2O75122 1294 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 GMNNO75496 209 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 BCAS2O75934 225 aaPredicted RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 KRT34O76011 436 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FGF18O76093 207 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 IPO13O94829 963 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 JCHAINP01591 159 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ITGB1P05556 798 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 SNRPB2P08579 225 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 LINGO3P0C6S8 592 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FAM58BPP0C7Q3 252 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 UMPSP11172 480 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 LAG3P18627 525 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ITGAXP20702 1163 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 PIK3R1P27986 724 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 PEX19P40855 299 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CPA2P48052 419 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 POLE2P56282 527 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ATP6V0D1P61421 351 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 TUBA4AP68366 448 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 SLC25A3Q00325 362 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FOLH1Q04609 750 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 TUBB3Q13509 450 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 TRIM25Q14258 630 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 PTK2BQ14289 1009 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 PDK3Q15120 406 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 RPS6KA2Q15349 733 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 SF1Q15637 639 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ZNF385BQ569K4 471 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ARL13AQ5H913 290 aaPredicted RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 MDH1BQ5I0G3 518 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CLLU1OSQ5K130 101 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 UBXN11Q5T124 520 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 DENND5AQ6IQ26 1287 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 LRRC8EQ6NSJ5 796 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FAM45BPQ6NSW5 357 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 RWDD4Q6NW29 188 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 NEPROQ6NW34 567 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 BORAQ6PGQ7 559 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 TTC7BQ86TV6 843 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 MON1AQ86VX9 555 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CAMK1DQ8IU85 385 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CROCCP3Q8IVE0 287 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CCDC103Q8IW40 242 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 COLGALT2Q8IYK4 626 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FAM9CQ8IZT9 166 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 DSELQ8IZU8 1212 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CLYBLQ8N0X4 340 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 LRRC43Q8N309 656 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ATP6V0D2Q8N8Y2 350 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 GSTCDQ8NEC7 633 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 TNIP2Q8NFZ5 429 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FAM45AQ8TCE6 357 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 MIPOL1Q8TD10 442 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 POF1BQ8WVV4 589 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 DUS3LQ96G46 650 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 FUBP3Q96I24 572 aaKnown RBP eCLIP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ZMAT2Q96NC0 199 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ZNF558Q96NG5 402 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ZNF599Q96NL3 588 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 PPP1R10Q96QC0 940 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 SORT1Q99523 831 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 IL12RB2Q99665 862 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 GATA5Q9BWX5 397 aaPredicted RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 SPATA16Q9BXB7 569 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 EIF2AQ9BY44 585 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 MRPL9Q9BYD2 267 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 YTHDF1Q9BYJ9 559 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 ULBP1Q9BZM6 244 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 LMAN2LQ9H0V9 348 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 SLC25A51Q9H1U9 297 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CCDC68Q9H2F9 335 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 NXF3Q9H4D5 531 aaKnown RBP6.08□□□□□ -1.44
CPSF2-205ENST00000556622 CWH43Q9H720 699 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 WDR41Q9HAD4 459 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 GLOD4Q9HC38 313 aa6.08□□□□□ -1.44
CPSF2-205ENST00000556622 PIGVQ9NUD9 493 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms