RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 IL17CQ9P0M4 197 aa13.03□□□□□ -0.32
TGFB3-204ENST00000556285 ANKMY1Q9P2S6 941 aa13.03□□□□□ -0.32
TGFB3-204ENST00000556285 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
TGFB3-204ENST00000556285 IGHV5-51A0A0C4DH38 117 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 OR2AG2A6NM03 316 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 CBFA2T2O43439 604 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 KATNA1O75449 491 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 SPAG6O75602 509 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 POP7O75817 140 aaKnown RBP13.02□□□□□ -0.33
TGFB3-204ENST00000556285 NDUFA10O95299 355 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 PBLDP30039 288 aaPredicted RBP13.02□□□□□ -0.33
TGFB3-204ENST00000556285 SLC1A1P43005 524 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 NR2C2P49116 596 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 FOXK1P85037 733 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 OLIG2Q13516 323 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 GTF2H3Q13889 308 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 KCNAB1Q14722 419 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 SLC1A5Q15758 541 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 RPE65Q16518 533 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 ODF2Q5BJF6 829 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 MICALCLQ6ZW33 695 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 PID1Q7Z2X4 250 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 PRSS42Q7Z5A4 293 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 RASGRP3Q8IV61 690 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 BEND7Q8N7W2 519 aaPredicted RBP13.02□□□□□ -0.33
TGFB3-204ENST00000556285 BLOC1S5Q8TDH9 187 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 APOBEC4Q8WW27 367 aaKnown RBP13.02□□□□□ -0.33
TGFB3-204ENST00000556285 RUFY1Q96T51 708 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 GORASP1Q9BQQ3 440 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 EFHD1Q9BUP0 239 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 AKIRIN1Q9H9L7 192 aaPredicted RBP13.02□□□□□ -0.33
TGFB3-204ENST00000556285 KLHL8Q9P2G9 620 aaPredicted RBP13.02□□□□□ -0.33
TGFB3-204ENST00000556285 PLAAQ9Y263 795 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 ALG6Q9Y672 507 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 KCNMB2Q9Y691 235 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 PCSK5Q92824 1860 aa13.02□□□□□ -0.33
TGFB3-204ENST00000556285 hCG_1818297A0A087WSY0 165 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 TOX3O15405 576 aaPredicted RBP13.01□□□□□ -0.33
TGFB3-204ENST00000556285 AGTP01019 485 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 FGF5P12034 268 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 FOLR1P15328 257 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 NELFEP18615 380 aaKnown RBP13.01□□□□□ -0.33
TGFB3-204ENST00000556285 SPAM1P38567 509 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 TFDP2Q14188 446 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 ERV3-1Q14264 604 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 GPRC6AQ5T6X5 926 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 HIST2H2BCQ6DN03 193 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 DUS1LQ6P1R4 473 aaKnown RBP13.01□□□□□ -0.33
TGFB3-204ENST00000556285 TMEM220Q6QAJ8 160 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 DET1Q7L5Y6 550 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 GLT6D1Q7Z4J2 308 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 AMZ2Q86W34 360 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 RNF214Q8ND24 703 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 STAMBPL1Q96FJ0 436 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 FCRL5Q96RD9 977 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 EPHA6Q9UF33 1036 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 LNPEPQ9UIQ6 1025 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 INTUQ9ULD6 942 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 ARL5AQ9Y689 179 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 CFAP20Q9Y6A4 193 aaKnown RBP13.01□□□□□ -0.33
TGFB3-204ENST00000556285 SHANK1Q9Y566 2161 aa13.01□□□□□ -0.33
TGFB3-204ENST00000556285 GLYATL1P3A0A0U1RQE8 302 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 PSTPIP1O43586 416 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 EPOP01588 193 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 VCLP18206 1134 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 FECHP22830 423 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 CASRP41180 1078 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 MC1RQ01726 317 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 DMPKQ09013 629 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 TBX2Q13207 712 aaPredicted RBP13□□□□□ -0.33
TGFB3-204ENST00000556285 UBAP2LQ14157 1087 aaKnown RBP13□□□□□ -0.33
TGFB3-204ENST00000556285 IL11RAQ14626 422 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 TFDP3Q5H9I0 405 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 FNBP1LQ5T0N5 605 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 PWWP2BQ6NUJ5 590 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 BZW1Q7L1Q6 419 aaKnown RBP13□□□□□ -0.33
TGFB3-204ENST00000556285 DDHD1Q8NEL9 900 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 CT55Q8WUE5 264 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 KRT35Q92764 455 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 P3H4Q92791 437 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 ZDHHC12Q96GR4 267 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 SLC41A2Q96JW4 573 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 TTC25Q96NG3 672 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 QKIQ96PU8 341 aaKnown RBP eCLIP13□□□□□ -0.33
TGFB3-204ENST00000556285 SRPK1Q96SB4 655 aaKnown RBP13□□□□□ -0.33
TGFB3-204ENST00000556285 INSM2Q96T92 566 aaPredicted RBP13□□□□□ -0.33
TGFB3-204ENST00000556285 MAP3K3Q99759 626 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 FICDQ9BVA6 458 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 HEMGNQ9BXL5 484 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 RAB33BQ9H082 229 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 TRABDQ9H4I3 376 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 FAM8A1Q9UBU6 413 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 TP53TG5Q9Y2B4 290 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 KCTD3Q9Y597 815 aa13□□□□□ -0.33
TGFB3-204ENST00000556285 CDC14CA4D256 554 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 GOLGA6L3A6NEY3 463 aa12.99□□□□□ -0.33
TGFB3-204ENST00000556285 MTSS1O43312 755 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms