RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 RSRC1Q96IZ7 334 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 BICC1Q9H694 974 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 KIF9Q9HAQ2 790 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 BPIFA1Q9NP55 256 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 SEPT11Q9NVA2 429 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 NSMCE4AQ9NXX6 385 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 DLGAP2Q9P1A6 1054 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 TBC1D29Q9UFV1 150 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 SWAP70Q9UH65 585 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 FBXO2Q9UK22 296 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 CORO1CQ9ULV4 474 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 GPR34Q9UPC5 381 aa2.94□□□□□ -1.94
SCFD1-218ENST00000556256 AAR2Q9Y312 384 aaKnown RBP2.94□□□□□ -1.94
SCFD1-218ENST00000556256 CROCCQ5TZA2 2017 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 FAM237AA0A1B0GTK4 181 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 FRMD3A2A2Y4 597 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 A6NCN8 305 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 EIF3CLB5ME19 914 aaKnown RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 K7ENM7 598 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 HCRTR2O43614 444 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 IPO7O95373 1038 aaKnown RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 FTCDO95954 541 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 LDHCP07864 332 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 RARGP13631 454 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 CEACAM1P13688 526 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 ACADSP16219 412 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 NFKBIAP25963 317 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 SHC1P29353 583 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 TLX1P31314 330 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 CLNS1AP54105 237 aaKnown RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 F2RL1P55085 397 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 RIGQ13278 110 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 ACVR2BQ13705 512 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 FRG1Q14331 258 aaKnown RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 DRAP1Q14919 205 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 C2orf68Q2NKX9 166 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 DUSP28Q4G0W2 176 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 JADE1Q6IE81 842 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 KLHL35Q6PF15 583 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 KCTD18Q6PI47 426 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 C16orf54Q6UWD8 224 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 CDC20BQ86Y33 519 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 RPAP2Q8IXW5 612 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 TTC39CQ8N584 583 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 ZBTB2Q8N680 514 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 LINC00612Q8N6U2 182 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 SCFD2Q8WU76 684 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 SMARCE1Q969G3 411 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 C1orf74Q96LT6 269 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 NEUROD6Q96NK8 337 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 NEURL2Q9BR09 285 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 EIF2B3Q9NR50 452 aaKnown RBP2.93□□□□□ -1.94
SCFD1-218ENST00000556256 TMEM181Q9P2C4 612 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 POLG2Q9UHN1 485 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 ACSL5Q9ULC5 683 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 PYGO1Q9Y3Y4 419 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 CSAG2Q9Y5P2 127 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 CEPT1Q9Y6K0 416 aa2.93□□□□□ -1.94
SCFD1-218ENST00000556256 TMEM202A6NGA9 273 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 CDRT15L2A8MXV6 281 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 SCAMP1O15126 338 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 KRTAP1-4P0C5Y4 121 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 ALOX12P18054 663 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 MAOAP21397 527 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 RAD23BP54727 409 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 CREB5Q02930 508 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 AIMP2Q13155 320 aaKnown RBP2.92□□□□□ -1.94
SCFD1-218ENST00000556256 CDONQ4KMG0 1287 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 ZNF613Q6PF04 617 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 RAD9BQ6WBX8 426 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 GLDNQ6ZMI3 551 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-218ENST00000556256 ADGRF2Q8IZF7 708 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 PDILTQ8N807 584 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 OR2T6Q8NHC8 308 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 GRHL3Q8TE85 626 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 TIGD1Q96MW7 591 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 FOXN4Q96NZ1 517 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 TMEM47Q9BQJ4 181 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 SDF4Q9BRK5 362 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 SYNCQ9H7C4 482 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 MMP25Q9NPA2 562 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 LTB4R2Q9NPC1 389 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 ADPRHL2Q9NX46 363 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 CNOT8Q9UFF9 292 aaKnown RBP2.92□□□□□ -1.94
SCFD1-218ENST00000556256 ASIC3Q9UHC3 531 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 VPS28Q9UK41 221 aa2.92□□□□□ -1.94
SCFD1-218ENST00000556256 MYO1GB0I1T2 1018 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 VILLO15195 856 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 NKX2-2O95096 273 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 PGM3O95394 542 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 FAM106CPP0CH98 169 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 ZNF182P17025 639 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-218ENST00000556256 GABRB1P18505 474 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 PRAMEP78395 509 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 GOLGA8DPQ0D2H9 430 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 NAE1Q13564 534 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 CUL4AQ13619 759 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 IRF3Q14653 427 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 ADIPOQQ15848 244 aa2.91□□□□□ -1.94
SCFD1-218ENST00000556256 ASTE1Q2TB18 679 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms