RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZFP37Q9Y6Q3 630 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 ILVBLA1L0T0 632 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 MTMR11A4FU01 709 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 H7C4K7 107 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CBX4O00257 560 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 EI24O14681 340 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PFDN1O60925 122 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 TULP3O75386 442 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ESR1P03372 595 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NCK1P16333 377 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 UGT1A6P19224 532 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 HTR1EP28566 365 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CTGFP29279 349 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PTGER3P43115 390 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CLCN4P51793 760 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 UFM1P61960 85 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 GPR17Q13304 367 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ZNF177Q13360 481 aaPredicted RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 ARHGEF6Q15052 776 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 TRIM71Q2Q1W2 868 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 C5orf22Q49AR2 442 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 FBXO48Q5FWF7 155 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 HABP4Q5JVS0 413 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 C6orf136Q5SQH8 315 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NANOGP8Q6NSW7 305 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 TAS2R42Q7RTR8 314 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PATL1Q86TB9 770 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 ADAMTSL2Q86TH1 951 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 HID1Q8IV36 788 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CROCCP3Q8IVE0 287 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 KIAA2013Q8IYS2 634 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CHCHD4Q8N4Q1 142 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 AADATQ8N5Z0 425 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 CDYL2Q8N8U2 506 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PAPD5Q8NDF8 572 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 FAM110BQ8TC76 370 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 METTL6Q8TCB7 284 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PNPT1Q8TCS8 783 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 EEF1AKMT1Q8WVE0 214 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 TMIGD2Q96BF3 282 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SDCCAG3Q96C92 435 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ISOC1Q96CN7 298 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 EXOC2Q96KP1 924 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ACOX2Q99424 681 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 ZBTB18Q99592 522 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SEPHS2Q99611 448 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 YTHDF1Q9BYJ9 559 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 MUC3BQ9H195 1237 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 NANOGQ9H9S0 305 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 SARS2Q9NP81 518 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 SLC52A3Q9NQ40 469 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 FKBPLQ9UIM3 349 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 FNDC3AQ9Y2H6 1198 aaKnown RBP6.92□□□□□ -1.3
TDP1-213ENST00000555880 MED16Q9Y2X0 877 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 PKP3Q9Y446 797 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 RAI2Q9Y5P3 530 aa6.92□□□□□ -1.3
TDP1-213ENST00000555880 A0A1B0GTL3 188 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 TCRBV5S2A0A599 114 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ASPDHA6ND91 283 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 TRIM64CA6NLI5 447 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 SLC38A8A6NNN8 435 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ANKRD66B4E2M5 251 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 E2F3O00716 465 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ENPP3O14638 875 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 OR4F21O95013 312 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 C1RP00736 705 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ALBP02768 609 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ZDHHC11BP0C7U3 371 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 COL6A1P12109 1028 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CKBP12277 381 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CDH1P12830 882 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 PSMA3P25788 255 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CST5P28325 142 aaPredicted RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 PRDX3P30048 256 aaKnown RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 SLC6A4P31645 630 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 RANBP1P43487 201 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ADARP55265 1226 aaKnown RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 EMX2Q04743 252 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ELAVL2Q12926 359 aaKnown RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 NR6A1Q15406 480 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 FAM98BQ52LJ0 330 aaKnown RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 SETMARQ53H47 684 aaPredicted RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 PAGE3Q5JUK9 113 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 PSAPL1Q6NUJ1 521 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 IL27RAQ6UWB1 636 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 SCIMPQ6UWF3 145 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CHST9Q7L1S5 443 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 RNF180Q86T96 592 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ZFAND4Q86XD8 727 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 FAM126BQ8IXS8 530 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 CPNE9Q8IYJ1 553 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 LRRC43Q8N309 656 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 DPP10Q8N608 796 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 MDGA1Q8NFP4 955 aa6.91□□□□□ -1.3
TDP1-213ENST00000555880 ZNF420Q8TAQ5 688 aaPredicted RBP6.91□□□□□ -1.3
TDP1-213ENST00000555880 GRIN3AQ8TCU5 1115 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms