RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 PCSK4Q6UW60 755 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 RBM12BQ8IXT5 1001 aaKnown RBP24.01■■□□□ 1.43
PRKCH-216ENST00000555542 FAM71DQ8N9W8 422 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 TTC9Q92623 222 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 WBP1Q96G27 269 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 TGM7Q96PF1 710 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 TEFMQ96QE5 360 aaKnown RBP24.01■■□□□ 1.43
PRKCH-216ENST00000555542 CTRCQ99895 268 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 CRLS1Q9UJA2 301 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 KCTD3Q9Y597 815 aa24.01■■□□□ 1.43
PRKCH-216ENST00000555542 GAPDHSO14556 408 aaPredicted RBP24■■□□□ 1.43
PRKCH-216ENST00000555542 CA5AP35218 305 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 GFERP55789 205 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 GPR18Q14330 331 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 CLCA4Q14CN2 919 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 CEACAM20Q6UY09 585 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 DCUN1D1Q96GG9 259 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 ZNF514Q96K75 400 aaPredicted RBP24■■□□□ 1.43
PRKCH-216ENST00000555542 SLC40A1Q9NP59 571 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 FAM8A1Q9UBU6 413 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 FEZ2Q9UHY8 353 aaPredicted RBP24■■□□□ 1.43
PRKCH-216ENST00000555542 PSMD13Q9UNM6 376 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 WDR37Q9Y2I8 494 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 DNMT3AQ9Y6K1 912 aaPredicted RBP24■■□□□ 1.43
PRKCH-216ENST00000555542 SLC30A1Q9Y6M5 507 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 CAPN6Q9Y6Q1 641 aa24■■□□□ 1.43
PRKCH-216ENST00000555542 MN1Q10571 1320 aaPredicted RBP24■■□□□ 1.43
PRKCH-216ENST00000555542 AHCTF1Q8WYP5 2266 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 PRR19A6NJB7 356 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 DDX3YO15523 660 aaKnown RBP23.99■■□□□ 1.43
PRKCH-216ENST00000555542 RASSF9O75901 435 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 ARSDP51689 593 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 MC2RQ01718 297 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 DMPKQ09013 629 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 LY6DQ14210 128 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 NFE2L1Q14494 772 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 PARP6Q2NL67 630 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 BEND7Q8N7W2 519 aaPredicted RBP23.99■■□□□ 1.43
PRKCH-216ENST00000555542 BMPERQ8N8U9 685 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 OR13C4Q8NGS5 318 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 ARHGAP9Q9BRR9 750 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 OGFRQ9NZT2 677 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 PCDHGA4Q9Y5G9 962 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 ATRXP46100 2492 aa23.99■■□□□ 1.43
PRKCH-216ENST00000555542 CAPN5O15484 640 aaPredicted RBP23.98■■□□□ 1.43
PRKCH-216ENST00000555542 C1QL1O75973 258 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 RALBP11234 206 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 ITGALP20701 1170 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 HADHAP40939 763 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 PLCL1Q15111 1095 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 P3H1Q32P28 736 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 SEL1L2Q5TEA6 688 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 CACNA2D3Q8IZS8 1091 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 NKD1Q969G9 470 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 ULK4Q96C45 1275 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 RTP4Q96DX8 246 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 C9orf72Q96LT7 481 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 ZPBPQ9BS86 351 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 TMEM121Q9BTD3 319 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 TSGA10Q9BZW7 698 aa23.98■■□□□ 1.43
PRKCH-216ENST00000555542 SMG1Q96Q15 3661 aaKnown RBP23.98■■□□□ 1.43
PRKCH-216ENST00000555542 POLR1CO15160 346 aaPredicted RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 RAD1O60671 282 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 ANKRD34CP0C6C1 535 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 CAPZBP47756 277 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 SEPHS1P49903 392 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 FOXM1Q08050 763 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 KLF1Q13351 362 aaPredicted RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 IRGCQ6NXR0 463 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 FAM83HQ6ZRV2 1179 aaPredicted RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 TAB3Q8N5C8 712 aaPredicted RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 RNF10Q8N5U6 811 aaKnown RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 RSC1A1Q92681 617 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 HES6Q96HZ4 224 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 LRRC40Q9H9A6 602 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 FBXO8Q9NRD0 319 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 IMP3Q9NV31 184 aaKnown RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 GUCA1BQ9UMX6 200 aa23.97■■□□□ 1.43
PRKCH-216ENST00000555542 R3HDM2Q9Y2K5 976 aaKnown RBP23.97■■□□□ 1.43
PRKCH-216ENST00000555542 CFAP99D6REC4 459 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 KRT86O43790 486 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 C9P02748 559 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 LEPRP48357 1165 aaKnown RBP23.96■■□□□ 1.43
PRKCH-216ENST00000555542 ZNF140P52738 457 aaPredicted RBP23.96■■□□□ 1.43
PRKCH-216ENST00000555542 SEPT6Q14141 434 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 RPE65Q16518 533 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 ZNF843Q8N446 348 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 NAT14Q8WUY8 206 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 ZDHHC12Q96GR4 267 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 FAM96AQ9H5X1 160 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 ARNT2Q9HBZ2 717 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 APMAPQ9HDC9 416 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 MGAQ8IWI9 3026 aa23.96■■□□□ 1.43
PRKCH-216ENST00000555542 TCRBV7S2A1N4TA0A589 114 aa23.95■■□□□ 1.42
PRKCH-216ENST00000555542 MGAT4DA6NG13 374 aa23.95■■□□□ 1.42
PRKCH-216ENST00000555542 CCL22O00626 93 aa23.95■■□□□ 1.42
PRKCH-216ENST00000555542 METTL18O95568 372 aa23.95■■□□□ 1.42
PRKCH-216ENST00000555542 GDF10P55107 478 aa23.95■■□□□ 1.42
PRKCH-216ENST00000555542 GSDMDP57764 484 aa23.95■■□□□ 1.42
PRKCH-216ENST00000555542 XIAPP98170 497 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms