RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 IRX4P78413 519 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 IRF9Q00978 393 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 DPTQ07507 201 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 CSHL1Q14406 222 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 RAET1GQ6H3X3 334 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 NEK5Q6P3R8 708 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 MACC1Q6ZN28 852 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 PHYKPLQ8IUZ5 450 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 NUDCD3Q8IVD9 361 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 RDH11Q8TC12 318 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 SNX19Q92543 992 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 INPP5DQ92835 1189 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 GLYATL1Q969I3 302 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 ZCCHC2Q9C0B9 1178 aaKnown RBP17.4■□□□□ 0.38
PSEN1-212ENST00000555254 CCDC134Q9H6E4 229 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 PREBQ9HCU5 417 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 SARS2Q9NP81 518 aaKnown RBP17.4■□□□□ 0.38
PSEN1-212ENST00000555254 TMEM216Q9P0N5 145 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 PCDHGA5Q9Y5G8 931 aa17.4■□□□□ 0.38
PSEN1-212ENST00000555254 FRYLO94915 3013 aa17.39■□□□□ 0.38
PSEN1-212ENST00000555254 FASNP49327 2511 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 FANCMQ8IYD8 2048 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3DA0A087WVF3 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3IA0A087WXS9 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3EA0A087X179 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3KA0A087X1G2 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 GMNCA6NCL1 334 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3FA6NER0 549 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3LB9A6J9 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 GPR39O43194 453 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 PLRG1O43660 514 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 MAGEC1O60732 1142 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 NIPSNAP2O75323 286 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 FSBPO95073 299 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TRIM16O95361 564 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 PROCP04070 461 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 VIMP08670 466 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3HP0C7X1 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 ATP1B2P14415 290 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 CPA3P15088 417 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 RGS4P49798 205 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 CSRP3P50461 194 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TAS2R38P59533 333 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 IL2P60568 153 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 ZNF460Q14592 562 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 SF3A2Q15428 464 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TTLL9Q3SXZ7 439 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 CTSL3PQ5NE16 218 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3GQ6DHY5 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3CQ6IPX1 549 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TBC1D3Q8IZP1 549 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 PLD6Q8N2A8 252 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 FOXJ1Q92949 421 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 NXNL1Q96CM4 212 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 GPR21Q99679 349 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 MRPL57Q9BQC6 102 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 BOCQ9BWV1 1114 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 MIR1-1HGQ9H1L0 117 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 C12orf65Q9H3J6 166 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 KDM4CQ9H3R0 1056 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 SGK2Q9HBY8 427 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 TMEM74BQ9NUR3 256 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 DHRS7Q9Y394 339 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 OAS3Q9Y6K5 1087 aaKnown RBP17.39■□□□□ 0.37
PSEN1-212ENST00000555254 GPR179Q6PRD1 2367 aa17.39■□□□□ 0.37
PSEN1-212ENST00000555254 IGLV3-16A0A075B6K0 115 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 LRRC72A6NJI9 287 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 KPNA5O15131 536 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 RNGTTO60942 597 aaKnown RBP17.38■□□□□ 0.37
PSEN1-212ENST00000555254 DHRS4L1P0CG22 281 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 C7P10643 843 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 MYL2P10916 166 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 TAC1P20366 129 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 ETV4P43268 484 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 ATP6V0D1P61421 351 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 ASPHQ12797 758 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 GTF2H3Q13889 308 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 COL9A2Q14055 689 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-212ENST00000555254 ACAP2Q15057 778 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 CSRP2Q16527 193 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 PDK4Q16654 411 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 WDR45BQ5MNZ6 344 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 ATG16L1Q676U5 607 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 LRRC8EQ6NSJ5 796 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 PIM3Q86V86 326 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 SYT12Q8IV01 421 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 DDHD1Q8NEL9 900 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 CADM4Q8NFZ8 388 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
PSEN1-212ENST00000555254 EPN3Q9H201 632 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 SPATS2LQ9NUQ6 558 aaKnown RBP17.38■□□□□ 0.37
PSEN1-212ENST00000555254 KLHL42Q9P2K6 505 aa17.38■□□□□ 0.37
PSEN1-212ENST00000555254 A0A1W2PQU0 124 aa17.37■□□□□ 0.37
PSEN1-212ENST00000555254 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
PSEN1-212ENST00000555254 FADS2P1A8MWK0 482 aa17.37■□□□□ 0.37
PSEN1-212ENST00000555254 PATE3B3GLJ2 98 aa17.37■□□□□ 0.37
PSEN1-212ENST00000555254 INPP4BO15327 924 aa17.37■□□□□ 0.37
PSEN1-212ENST00000555254 DNAJC6O75061 913 aa17.37■□□□□ 0.37
PSEN1-212ENST00000555254 LRP3O75074 770 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms