RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PI4KAP42356 2102 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 GOLGA8TH3BQL2 631 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 QSOX1O00391 747 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 GPR39O43194 453 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 GRID2O43424 1007 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 NUAK1O60285 661 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 MTX2O75431 263 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 VAPBO95292 243 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 AHSGP02765 367 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ANXA6P08133 673 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 DGKAP23743 735 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ACRV1P26436 265 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 PMLP29590 882 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 FOXN2P32314 431 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 POLD2P49005 469 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 TTPAP49638 278 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 GPS2Q13227 327 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 THOC5Q13769 683 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ITIH4Q14624 930 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SHBQ15464 509 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SMAD1Q15797 465 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 RNF187Q5TA31 235 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 CRTC3Q6UUV7 619 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 PACS1Q6VY07 963 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 TIFABQ6ZNK6 161 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ADGRG6Q86SQ4 1221 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SDCCAG8Q86SQ7 713 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 LRRTM4Q86VH4 590 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SERPINA9Q86WD7 417 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 GATAD2AQ86YP4 633 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 TRAPPC5Q8IUR0 188 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 NAXDQ8IW45 347 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 RIBC1Q8N443 379 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 CALML6Q8TD86 181 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SETD7Q8WTS6 366 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 PKNOX2Q96KN3 472 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 FAM167BQ9BTA0 163 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 DUSP23Q9BVJ7 150 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 CENPHQ9H3R5 247 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 SLC32A1Q9H598 525 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 FAM96AQ9H5X1 160 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 MRPL40Q9NQ50 206 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 IARS2Q9NSE4 1012 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 C20orf96Q9NUD7 363 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ZDHHC3Q9NYG2 299 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 NLGN3Q9NZ94 848 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 NCKIPSDQ9NZQ3 722 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 PSMC3IPQ9P2W1 217 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ATXN10Q9UBB4 475 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ZNHIT2Q9UHR6 403 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 VPS9D1Q9Y2B5 631 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 GPSM3Q9Y4H4 160 aa10.76□□□□□ -0.69
SHMT2-218ENST00000555213 OAS3Q9Y6K5 1087 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 PTPRZ1P23471 2315 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF106Q9H2Y7 1883 aaKnown RBP10.76□□□□□ -0.69
SHMT2-218ENST00000555213 DOCK9Q9BZ29 2069 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 TRBV5-4A0A0C4DH59 114 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 KLHL33A6NCF5 533 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 OR51F1A6NGY5 319 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 AGAP14A8MT82 685 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 LMO7DNF2Z398 122 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 SLC30A4O14863 429 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 SCAMP1O15126 338 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 KMOO15229 486 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 POLR3GO15318 223 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 CD3EAPO15446 510 aaKnown RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 FFAR2O15552 330 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 RFPL1O75677 317 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF8P17098 575 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 CA5AP35218 305 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 CSRP3P50461 194 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 TMEM115Q12893 351 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 DBN1Q16643 649 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 INSCQ1MX18 579 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 PYCR3Q53H96 274 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 LVRNQ6Q4G3 990 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 TAF8Q7Z7C8 310 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 KCNMB4Q86W47 210 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 CTAGE3PQ8IX95 158 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 LMNTD2Q8IXW0 634 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 ACVR1CQ8NER5 493 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 GLMNQ92990 594 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 SCARF2Q96GP6 870 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 TSSK1BQ9BXA7 367 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 TCEAL2Q9H3H9 227 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 MARCH4Q9P2E8 410 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-218ENST00000555213 KLF15Q9UIH9 416 aa10.75□□□□□ -0.69
SHMT2-218ENST00000555213 GOLGA6L10A6NI86 522 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 TPP1O14773 563 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 CHUKO15111 745 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 DNAJC6O75061 913 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 AP2A2O94973 939 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 S1PR4O95977 384 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 PRSS56P0CW18 603 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ACP5P13686 325 aa10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ATP1B2P14415 290 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF7P17097 686 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-218ENST00000555213 OGNP20774 298 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms