RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NUDT21O43809 227 aaKnown RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 CSO75390 466 aaKnown RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 ATP1B2P14415 290 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 SLC19A1P41440 591 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 PAFAH1B1P43034 410 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 PRLHRP49683 370 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 UBE2IP63279 158 aaKnown RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 DMPKQ09013 629 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 AMZ1Q400G9 498 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 AFTPHQ6ULP2 937 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 AMZ2Q86W34 360 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 PPIL6Q8IXY8 311 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 GALNT15Q8N3T1 639 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 GPR150Q8NGU9 434 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 OR4L1Q8NH43 312 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 JPH3Q8WXH2 748 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 DCUN1D1Q96GG9 259 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 SIGLEC10Q96LC7 697 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 WDR83Q9BRX9 315 aaKnown RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 ZCCHC2Q9C0B9 1178 aaKnown RBP12.13□□□□□ -0.47
SYNE2-214ENST00000554928 ABCG4Q9H172 646 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 RDH14Q9HBH5 336 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 EVA1BQ9NVM1 165 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 TMEM9Q9P0T7 183 aa12.13□□□□□ -0.47
SYNE2-214ENST00000554928 TRABD2BA6NFA1 517 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 RHPN2P1A8MT19 583 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 D6RAR5 112 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CCDC188H7C350 402 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 RAD51CO43502 376 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 VAPBO95292 243 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CAPNS1P04632 268 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 POLBP06746 335 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ITGB6P18564 788 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CD1CP29017 333 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ALDH4A1P30038 563 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CSF2RBP32927 897 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 FASLGP48023 281 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ARCN1P48444 511 aaKnown RBP12.12□□□□□ -0.47
SYNE2-214ENST00000554928 PRAMEP78395 509 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 HHEXQ03014 270 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 NR1D2Q14995 579 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ISXQ2M1V0 245 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ABRAXAS1Q6UWZ7 409 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 UNQ6494/PRO21346Q6UXR6 183 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ZNF574Q6ZN55 896 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-214ENST00000554928 USP53Q70EK8 1073 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 IGDCC3Q8IVU1 814 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 UNC5BQ8IZJ1 945 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 OR2L2Q8NH16 312 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 MDM1Q8TC05 714 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ATXN7L3BQ96GX2 97 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 NRTNQ99748 197 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 NUDT22Q9BRQ3 303 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 TBC1D10AQ9BXI6 508 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 PLAC1Q9HBJ0 212 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 MRM3Q9HC36 420 aaKnown RBP12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CPNE7Q9UBL6 633 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 SNX24Q9Y343 169 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ENTPD2Q9Y5L3 495 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CFAP20Q9Y6A4 193 aaKnown RBP12.12□□□□□ -0.47
SYNE2-214ENST00000554928 ZFC3H1O60293 1989 aaKnown RBP12.12□□□□□ -0.47
SYNE2-214ENST00000554928 CHD8Q9HCK8 2581 aa12.12□□□□□ -0.47
SYNE2-214ENST00000554928 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 IGHV1OR21-1A0A087WYE8 117 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 ZCWPW2A0A1B0GU75 182 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 IQCF5A8MTL0 148 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 CD3EAPO15446 510 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 CDK4P11802 303 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 MLNP12872 115 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 PNLIPP16233 465 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 IDSP22304 550 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 MPSTP25325 297 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 PDHA2P29803 388 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 PREPP48147 710 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 ITGA8P53708 1063 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 SPIDRQ14159 915 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 ITIH4Q14624 930 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 RPE65Q16518 533 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 HP1BP3Q5SSJ5 553 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 AGAP9Q5VTM2 703 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 METRNLQ641Q3 311 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 HIBCHQ6NVY1 386 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 CASC4Q6P4E1 433 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
SYNE2-214ENST00000554928 NLRP9Q7RTR0 991 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 CFAP206Q8IYR0 622 aa12.11□□□□□ -0.47
SYNE2-214ENST00000554928 OR6C4Q8NGE1 309 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms