RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 NOS1APO75052 506 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 SNX4O95219 450 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 NMBRP28336 390 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 NOS2P35228 1153 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 ST13P50502 369 aaKnown RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PYCR3Q53H96 274 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 SYT6Q5T7P8 510 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 FSTL5Q8N475 847 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 BPIFB1Q8TDL5 484 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PMEPA1Q969W9 287 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 NTN4Q9HB63 628 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 TAS2R9Q9NYW1 312 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 MAT2BQ9NZL9 334 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 NUDT5Q9UKK9 219 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 PNMA8BQ9ULN7 279 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 VPS4AQ9UN37 437 aa15.49■□□□□ 0.07
SYNE3-203ENST00000554873 RUVBL2Q9Y230 463 aaKnown RBP15.49■□□□□ 0.07
SYNE3-203ENST00000554873 ZSWIM8A7E2V4 1837 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 HMX3A6NHT5 357 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 BEST1O76090 585 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 IL7P13232 177 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 SLC6A2P23975 617 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 SERPINH1P50454 418 aaKnown RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 C1QTNF8P60827 252 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 DCAF4L1Q3SXM0 396 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 FBXO47Q5MNV8 452 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 NDUFAF5Q5TEU4 345 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 SDE2Q6IQ49 451 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 HFE2Q6ZVN8 426 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 STK32CQ86UX6 486 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 PTRH1Q86Y79 214 aaKnown RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 HID1Q8IV36 788 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 TCAIMQ8N3R3 496 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 DTX3Q8N9I9 347 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 METTL2AQ96IZ6 378 aaKnown RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 GPR22Q99680 433 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 KAT8Q9H7Z6 458 aaKnown RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 STAP1Q9ULZ2 295 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 A3GALT2U3KPV4 340 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 I6L893 689 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 FXYD1O00168 92 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 AVPR1AP37288 418 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 GPR50Q13585 617 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 CAPRIN1Q14444 709 aaKnown RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 MFSD10Q14728 455 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 STARD3Q14849 445 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 TPRG1LQ5T0D9 272 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 ZC3HC1Q86WB0 502 aaKnown RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 KCTD4Q8WVF5 259 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 PHOX2BQ99453 314 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 SEPHS2Q99611 448 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 C17orf62Q9BQA9 187 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 C1QTNF7Q9BXJ2 289 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 C6orf62Q9GZU0 229 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-203ENST00000554873 DCSTAMPQ9H295 470 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 ZFP14Q9HCL3 533 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 UBP1Q9NZI7 540 aa15.48■□□□□ 0.07
SYNE3-203ENST00000554873 UPK1AO00322 258 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 NR5A2O00482 541 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 CLDN5O00501 218 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 PIRO00625 290 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 AP3D1O14617 1153 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 SSX4O60224 188 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 ZNF780AO75290 641 aaPredicted RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 TCF3P15923 654 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 ADRA1BP35368 520 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 NPY2RP49146 381 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 MLLT6P55198 1093 aaPredicted RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 BNC1Q01954 994 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 FADDQ13158 208 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 USP10Q14694 798 aaKnown RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 MARCH8Q5T0T0 291 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 ALKAL1Q6UXT8 129 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 NPWQ8N729 165 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 WNT8BQ93098 351 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 TMBIM1Q969X1 311 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 RPL10LQ96L21 214 aaKnown RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 XPR1Q9UBH6 696 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 EFCAB9A8MZ26 197 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 LRIG2O94898 1065 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 MED26O95402 600 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 DBTP11182 482 aaKnown RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 AKAP5P24588 427 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 PSMB9P28065 219 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 ZNF517Q6ZMY9 492 aaPredicted RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 RBM23Q86U06 439 aaKnown RBP15.47■□□□□ 0.07
SYNE3-203ENST00000554873 APPL2Q8NEU8 664 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 MCOLN3Q8TDD5 553 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 ZNF566Q969W8 418 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 RNF145Q96MT1 663 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 MBOAT4Q96T53 435 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 C16orf70Q9BSU1 422 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 NUAK2Q9H093 628 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 PCDHGB6Q9Y5F9 930 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 PPP2R3BQ9Y5P8 575 aa15.47■□□□□ 0.07
SYNE3-203ENST00000554873 A0A0J9YYE9 177 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 UBXN8O00124 270 aa15.46■□□□□ 0.07
SYNE3-203ENST00000554873 ANGPT2O15123 496 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms