RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PRSS55Q6UWB4 352 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZPBP2Q6X784 338 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CLEC17AQ6ZS10 378 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 UBE2R2Q712K3 238 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TMPRSS9Q7Z410 1059 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CAMK1DQ8IU85 385 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SLC9A9Q8IVB4 645 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZCCHC7Q8N3Z6 543 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 WDTC1Q8N5D0 677 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SLC15A4Q8N697 577 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 OR2T34Q8NGX1 318 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 OR8K5Q8NH50 307 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 OLIG1Q8TAK6 271 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GATA6Q92908 595 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 IFT43Q96FT9 208 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CPB2Q96IY4 423 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 FEM1CQ96JP0 617 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CLIC6Q96NY7 704 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PSMB7Q99436 277 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 FAM118BQ9BPY3 351 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SF3B5Q9BWJ5 86 aaKnown RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CALN1Q9BXU9 219 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TTYH3Q9C0H2 523 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 TASP1Q9H6P5 420 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 LRRC19Q9H756 370 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NOD2Q9HC29 1040 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NGBQ9NPG2 151 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 CENPMQ9NSP4 180 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 SELENONQ9NZV5 590 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 APEX2Q9UBZ4 518 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 REV1Q9UBZ9 1251 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 RAB23Q9ULC3 237 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 PRG3Q9Y2Y8 225 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-206ENST00000554429 NEUROG3Q9Y4Z2 214 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 GPR45Q9Y5Y3 372 aa2.7□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF638Q14966 1978 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SPAG17Q6Q759 2223 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NCANO14594 1321 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SMIM28A0A1B0GU29 152 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 A8MXE2 369 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 LAD1O00515 517 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 EIF3DO15371 548 aaKnown RBP eCLIP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CCL16O15467 120 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 B4GALT5O43286 388 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FAM189A1O60320 539 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NOBOXO60393 691 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SUPT3HO75486 399 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CSDE1O75534 798 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 RBBP9O75884 186 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SASH3O75995 380 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 BMP10O95393 424 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CTDNEP1O95476 244 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CST3P01034 146 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TGFAP01135 160 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ALPPP05187 535 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 EDN1P05305 212 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PRKCBP05771 671 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 HMBSP08397 361 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ALPPL2P10696 532 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KITP10721 976 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ETS1P14921 441 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 KRT4P19013 534 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 S100A1P23297 94 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SP100P23497 879 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 AKAP5P24588 427 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 AOAHP28039 575 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SLC7A1P30825 629 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MCM7P33993 719 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ARL3P36405 182 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MAGEA1P43355 309 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MECP2P51608 486 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NDUFA8P51970 172 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ATP12AP54707 1039 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NOMO3P69849 1222 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PRAMEP78395 509 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GPR17Q13304 367 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 CUL3Q13618 768 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PTK6Q13882 451 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 NOMO1Q15155 1222 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MAPK6Q16659 721 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF628Q5EBL2 1059 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TRIM61Q5EBN2 209 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 PPM1JQ5JR12 505 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 SPECC1LQ69YQ0 1117 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MFSD7Q6UXD7 560 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 UNC5AQ6ZN44 842 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 USP45Q70EL2 814 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 TRILQ7L0X0 811 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 MAEAQ7L5Y9 396 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 LIMS2Q7Z4I7 341 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FJX1Q86VR8 437 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FAM217AQ8IXS0 508 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 DDIASQ8IXT1 998 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GSPT2Q8IYD1 628 aaKnown RBP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 OFCC1Q8IZS5 231 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 AGGF1Q8N302 714 aaeCLIP2.69□□□□□ -1.98
PRPF39-206ENST00000554429 GALNT4Q8N4A0 578 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 FRMD1Q8N878 549 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 C4orf32Q8N8J7 132 aa2.69□□□□□ -1.98
PRPF39-206ENST00000554429 EIF1ADQ8N9N8 165 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms