RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NLE1Q9NVX2 485 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-201ENST00000554409 PDP2Q9P2J9 529 aa7.4□□□□□ -1.22
LINC00640-201ENST00000554409 CPNE7Q9UBL6 633 aa7.4□□□□□ -1.22
LINC00640-201ENST00000554409 LOXL2Q9Y4K0 774 aa7.4□□□□□ -1.22
LINC00640-201ENST00000554409 KCTD3Q9Y597 815 aa7.4□□□□□ -1.22
LINC00640-201ENST00000554409 URB1O60287 2271 aaKnown RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 MN1Q10571 1320 aaPredicted RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 IGLV3-16A0A075B6K0 115 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 TRBV23OR9-2A0A075B6M9 112 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 MROH6A6NGR9 719 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 OR2AG2A6NM03 316 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 PDZK1P1A8MUH7 402 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 NVLO15381 856 aaKnown RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 POP7O75817 140 aaKnown RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 JMJD7P0C870 316 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 RALBP11234 206 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 HGFP14210 728 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 BRAFP15056 766 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 MSH3P20585 1137 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 SLC5A2P31639 672 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 AKT1P31749 480 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 CTSCP53634 463 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 UCNP55089 124 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 CCDC173Q0VFZ6 552 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 CDH17Q12864 832 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 SEMA5AQ13591 1074 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 C16orf72Q14CZ0 275 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 PHF19Q5T6S3 580 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 NKAIN2Q5VXU1 208 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 C4orf22Q6V702 233 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 TMEM26Q6ZUK4 368 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 USP53Q70EK8 1073 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 AMZ2Q86W34 360 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 ZNF761Q86XN6 746 aaPredicted RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 NXPE1Q8N323 547 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 STYXQ8WUJ0 223 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 HEXDCQ8WVB3 486 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 AHCYL2Q96HN2 611 aaKnown RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 DNAJC1Q96KC8 554 aaKnown RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 LINC00615Q96LM1 132 aaPredicted RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 RANBP9Q96S59 729 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 PRORYQ9H606 182 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 ETNK1Q9HBU6 452 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 SLC40A1Q9NP59 571 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 AKAP7Q9P0M2 348 aaPredicted RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 SCHIP1Q9P0W5 487 aaPredicted RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 PAK5Q9P286 719 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 ZNF624Q9P2J8 865 aaPredicted RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 CRLS1Q9UJA2 301 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 RIMKLBQ9ULI2 386 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 ZNF148Q9UQR1 794 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 DRG1Q9Y295 367 aaKnown RBP7.39□□□□□ -1.23
LINC00640-201ENST00000554409 DNAJC16Q9Y2G8 782 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 FREM2Q5SZK8 3169 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 DMXL2Q8TDJ6 3036 aa7.39□□□□□ -1.23
LINC00640-201ENST00000554409 PRAMEF33A0A0G2JMD5 474 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 C17orf113A0A1B0GUU1 675 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 HEATR9A2RTY3 570 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 GOLGA6L3A6NEY3 463 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 MGAT4DA6NG13 374 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 B4E171 279 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TOX3O15405 576 aaPredicted RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 SGTAO43765 313 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PRAMEF10O60809 474 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 GAS8O95995 478 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 VIPP01282 170 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 IFNB1P01574 187 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 FGGP02679 453 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 C9P02748 559 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ANKRD34CP0C6C1 535 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ATP1B2P14415 290 aaPredicted RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TPH1P17752 444 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ITIH1P19827 911 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ACRV1P26436 265 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 RPL10P27635 214 aaKnown RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CD82P27701 267 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 MC4RP32245 332 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 ETV5P41161 510 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TSPAN7P41732 249 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 HALP42357 657 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 PRLHRP49683 370 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 DRG2P55039 364 aaKnown RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TMPRSS3P57727 454 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TMPRSS15P98073 1019 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CACNG1Q06432 222 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 SNX1Q13596 522 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 LAMB3Q13751 1172 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 POU6F1Q14863 301 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 CLCA4Q14CN2 919 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 SEPT7Q16181 437 aaKnown RBP7.38□□□□□ -1.23
LINC00640-201ENST00000554409 FNBP1LQ5T0N5 605 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 BROXQ5VW32 411 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 METRNLQ641Q3 311 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 TMEM220Q6QAJ8 160 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 XKR5Q6UX68 686 aa7.38□□□□□ -1.23
LINC00640-201ENST00000554409 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms