RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 ARL5AQ9Y689 179 aa11.68□□□□□ -0.54
TRAPPC6B-204ENST00000554018 MN1Q10571 1320 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 OR2AG2A6NM03 316 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CAPN5O15484 640 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RAD1O60671 282 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PPFIA2O75334 1257 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 C9P02748 559 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ITGB2P05107 769 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 LIFP15018 202 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 AMD1P17707 334 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 LEPRP48357 1165 aaKnown RBP11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 VAV2P52735 878 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ITGA9Q13797 1035 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 GPR18Q14330 331 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TBR1Q16650 682 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CEACAM20Q6UY09 585 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 KIAA1328Q86T90 577 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 AMZ2Q86W34 360 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 GAS2L3Q86XJ1 694 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 DDHD1Q8NEL9 900 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 OR4K2Q8NGD2 314 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CCDC110Q8TBZ0 833 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ZNF398Q8TD17 642 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 NAT14Q8WUY8 206 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RSC1A1Q92681 617 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CXorf40BQ96DE9 158 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RNF31Q96EP0 1072 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 C9orf72Q96LT7 481 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TEFMQ96QE5 360 aaKnown RBP11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FERMT1Q9BQL6 677 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ZCCHC2Q9C0B9 1178 aaKnown RBP11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FKBPLQ9UIM3 349 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PILRAQ9UKJ1 303 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PSMD13Q9UNM6 376 aa11.67□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RP1L1Q8IWN7 2480 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 HECTD1Q9ULT8 2610 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 A0A0U1RQJ8 604 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 C2orf81A6NN90 581 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 KIF1CO43896 1103 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 KCNJ13O60928 360 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 STK10O94804 968 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TJP3O95049 919 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ZIC2O95409 532 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PRAMEF1O95521 474 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ANKRD34CP0C6C1 535 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FAM87AP0C7U9 286 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 MSH3P20585 1137 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 LPOP22079 712 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PBLDP30039 288 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 AKT1P31749 480 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CETN2P41208 172 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SEPHS1P49903 392 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 MSLNQ13421 630 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 NFE2L1Q14494 772 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SPARCL1Q14515 664 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PRPSAP1Q14558 356 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TAF1AQ15573 450 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RPE65Q16518 533 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FNBP1LQ5T0N5 605 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 DET1Q7L5Y6 550 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TIPARPQ7Z3E1 657 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 BEND7Q8N7W2 519 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 GPR150Q8NGU9 434 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SPATA13Q96N96 652 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ARHGAP9Q9BRR9 750 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 DESI2Q9BSY9 194 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SLC12A9Q9BXP2 914 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 POT1Q9NUX5 634 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SMOXQ9NWM0 555 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SIDT1Q9NXL6 827 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 AMFRQ9UKV5 643 aa11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PACSIN2Q9UNF0 486 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 AAR2Q9Y312 384 aaKnown RBP11.66□□□□□ -0.54
TRAPPC6B-204ENST00000554018 C5orf60A6NFR6 353 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 B8ZZF3 427 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CCL22O00626 93 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 POLR1CO15160 346 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RASSF9O75901 435 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 STK17BO94768 372 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 HALP42357 657 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 CAPZBP47756 277 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PPP1CAP62136 330 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 SH3BP2P78314 561 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TMPRSS15P98073 1019 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FOXM1Q08050 763 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 DMPKQ09013 629 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 DENND5AQ6IQ26 1287 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FAM92BQ6ZTR7 304 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 PEX26Q7Z412 305 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TMEM139Q8IV31 216 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 RBM12BQ8IXT5 1001 aaKnown RBP11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 UNC5BQ8IZJ1 945 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 NLGN4XQ8N0W4 816 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 NLGN4YQ8NFZ3 816 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ZPBPQ9BS86 351 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 FAM96AQ9H5X1 160 aa11.65□□□□□ -0.54
TRAPPC6B-204ENST00000554018 ASB8Q9H765 288 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms