RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 DTX3LQ8TDB6 740 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 HEXDCQ8WVB3 486 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 SORCS1Q8WY21 1168 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ECHDC3Q96DC8 303 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MFSD3Q96ES6 412 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PGM2Q96G03 612 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CERS2Q96G23 380 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CDKN2AIPNLQ96HQ2 116 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CABS1Q96KC9 395 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 TM9SF2Q99805 663 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CPNE1Q99829 537 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 GABRG3Q99928 467 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 OMDQ99983 421 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 OSBPL6Q9BZF3 934 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 CENPHQ9H3R5 247 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MFSD1Q9H3U5 465 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 TMBIM4Q9HC24 238 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ZDHHC4Q9NPG8 344 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PRSS16Q9NQE7 514 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 PSMC3IPQ9P2W1 217 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 MBD1Q9UIS9 605 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF180Q9UJW8 692 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 GPR55Q9Y2T6 319 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-202ENST00000553619 NFS1Q9Y697 457 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 ATG2BQ96BY7 2078 aa4.99□□□□□ -1.61
VTI1B-202ENST00000553619 KIAA1549LQ6ZVL6 1849 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 C1orf232A0A0U1RR37 186 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ZCWPW2A0A1B0GU75 182 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 KANSL1LA0AUZ9 987 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM82A0PJX8 343 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CAPN8A6NHC0 703 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 HRKO00198 91 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CD3EAPO15446 510 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TSPAN6O43657 245 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 LDB2O43679 373 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 AP1G1O43747 822 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TRIM13O60858 407 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 NDUFS3O75489 264 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 BANF1O75531 89 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CLDN7O95471 211 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 KLF8O95600 359 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 EGFP01133 1207 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MT-ND3P03897 115 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MPOP05164 745 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 HLA-EP13747 358 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 HOXB2P14652 356 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF7P17097 686 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CTPS1P17812 591 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 KRT15P19012 456 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 PI3P19957 117 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ITGALP20701 1170 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 OGNP20774 298 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SDHBP21912 280 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 GKP32189 559 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 HNF1BP35680 557 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SPAM1P38567 509 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 GP5P40197 560 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MAGEA9P43362 315 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TTPAP49638 278 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 DGKEP52429 567 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SLC12A2P55011 1212 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CRADDP78560 199 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SRSF3P84103 164 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SATB1Q01826 763 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TFF2Q03403 129 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ACVR1Q04771 509 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CACNG1Q06432 222 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ZNF844Q08AG5 666 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 OLIG2Q13516 323 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 LAPTM5Q13571 262 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ITGA9Q13797 1035 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CST6Q15828 149 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 SEPT7Q16181 437 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 KCTD19Q17RG1 926 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 KBTBD12Q3ZCT8 623 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TTC31Q49AM3 519 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 GPR33Q49SQ1 333 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TMEM52BQ4KMG9 183 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 HSP90AA5PQ58FG0 334 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 ZRANB3Q5FWF4 1079 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 FAM182AQ5T1J6 154 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TEDDM1Q5T9Z0 273 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 RNF187Q5TA31 235 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 EMC10Q5UCC4 262 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 UGT3A1Q6NUS8 523 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 NEK5Q6P3R8 708 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 AFTPHQ6ULP2 937 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CRTC1Q6UUV9 634 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CES3Q6UWW8 571 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 USP30Q70CQ3 517 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MARK2Q7KZI7 788 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CCDC91Q7Z6B0 441 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 RASSF3Q86WH2 238 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TMPRSS6Q8IU80 811 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 MMAAQ8IVH4 418 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 OTUD6BQ8N6M0 293 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
VTI1B-202ENST00000553619 TXNDC5Q8NBS9 432 aaKnown RBP4.98□□□□□ -1.61
VTI1B-202ENST00000553619 CHST14Q8NCH0 376 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms