RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CPNE7Q9UBL6 633 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 SOX13Q9UN79 622 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 EPG5Q9HCE0 2579 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 C17orf113A0A1B0GUU1 675 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 OR51F1A6NGY5 319 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 PDZK1P1A8MUH7 402 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 C1QTNF9BB2RNN3 333 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 TMX2-CTNND1H3BSU7 103 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 QSOX1O00391 747 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 B4GAT1O43505 415 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 CAPNS1P04632 268 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 C1QTNF9P0C862 333 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 PRSS56P0CW18 603 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 EPHA4P54764 986 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 CRADDP78560 199 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 GPLD1P80108 840 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 AARS2Q5JTZ9 985 aaKnown RBP18.12■□□□□ 0.49
CPSF2-202ENST00000553427 METRNLQ641Q3 311 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 HOOK3Q86VS8 718 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 RBM12BQ8IXT5 1001 aaKnown RBP18.12■□□□□ 0.49
CPSF2-202ENST00000553427 MPP5Q8N3R9 675 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 Q8N9G6 341 aaPredicted RBP18.12■□□□□ 0.49
CPSF2-202ENST00000553427 KDF1Q8NAX2 398 aaPredicted RBP18.12■□□□□ 0.49
CPSF2-202ENST00000553427 HM13Q8TCT9 377 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 CNTNAP3BQ96NU0 1288 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 DPYSL5Q9BPU6 564 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.12■□□□□ 0.49
CPSF2-202ENST00000553427 CNTNAP3Q9BZ76 1288 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 EPB41L1Q9H4G0 881 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 POT1Q9NUX5 634 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 SCHIP1Q9P0W5 487 aaPredicted RBP18.12■□□□□ 0.49
CPSF2-202ENST00000553427 ASIC3Q9UHC3 531 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 ACSL5Q9ULC5 683 aa18.12■□□□□ 0.49
CPSF2-202ENST00000553427 IGHV1OR21-1A0A087WYE8 117 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 MAGEB16A2A368 324 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 TRABD2BA6NFA1 517 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 LILRA5A6NI73 299 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 DNALI1O14645 258 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 CPNE6O95741 557 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 CCKBRP32239 447 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 PPARGP37231 505 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 HALP42357 657 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 OR1D5P58170 312 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 DR1Q01658 176 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 DHX34Q14147 1143 aaKnown RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 NFE2L1Q14494 772 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 ZNF658BQ4V348 819 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 XKR5Q6UX68 686 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 SYT10Q6XYQ8 523 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 FAM83HQ6ZRV2 1179 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 MICALCLQ6ZW33 695 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 PCGF5Q86SE9 256 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 BEND7Q8N7W2 519 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 OR6P1Q8NGX9 317 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 LIN37Q96GY3 246 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 TMEM74Q96NL1 305 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 SYNDIG1Q9H7V2 258 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 ZNF624Q9P2J8 865 aaPredicted RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 ENTPD2Q9Y5L3 495 aa18.11■□□□□ 0.49
CPSF2-202ENST00000553427 MAP1BP46821 2468 aaKnown RBP18.11■□□□□ 0.49
CPSF2-202ENST00000553427 FAM237BA0A1B0GVD1 139 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 SDR42E2A6NKP2 422 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 F8W8V4 182 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 SMAPO00193 183 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 CASC3O15234 703 aaKnown RBP18.1■□□□□ 0.49
CPSF2-202ENST00000553427 AVILO75366 819 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 IVDP26440 423 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 NMBRP28336 390 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 CD1CP29017 333 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 SLC19A1P41440 591 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 ZFP36L1Q07352 338 aaKnown RBP18.1■□□□□ 0.49
CPSF2-202ENST00000553427 FASTKD1Q53R41 847 aaKnown RBP18.1■□□□□ 0.49
CPSF2-202ENST00000553427 KIAA0930Q6ICG6 404 aaPredicted RBP18.1■□□□□ 0.49
CPSF2-202ENST00000553427 JAMLQ86YT9 394 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 SLITRK4Q8IW52 837 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 KLHL7Q8IXQ5 586 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 SLC38A3Q99624 504 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 CCM2Q9BSQ5 444 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 CATSPERZQ9NTU4 200 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 KCNK4Q9NYG8 393 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 SAMD15Q9P1V8 674 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 PCDHB1Q9Y5F3 818 aa18.1■□□□□ 0.49
CPSF2-202ENST00000553427 TRBV23OR9-2A0A075B6M9 112 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 ARNTP27540 789 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 RPL10P27635 214 aaKnown RBP18.09■□□□□ 0.49
CPSF2-202ENST00000553427 ALDH4A1P30038 563 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 PBLDP30039 288 aaPredicted RBP18.09■□□□□ 0.49
CPSF2-202ENST00000553427 TTPAP49638 278 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 TERF1P54274 439 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 DRG2P55039 364 aaKnown RBP18.09■□□□□ 0.49
CPSF2-202ENST00000553427 INHBCP55103 352 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 RPA4Q13156 261 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 SEPT7Q16181 437 aaKnown RBP18.09■□□□□ 0.49
CPSF2-202ENST00000553427 MAP9Q49MG5 647 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 IGF2-ASQ6U949 168 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 TRIM48Q8IWZ4 208 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 CLDN19Q8N6F1 224 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 OR10G6Q8NH81 332 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 MFSD3Q96ES6 412 aa18.09■□□□□ 0.49
CPSF2-202ENST00000553427 WDR37Q9Y2I8 494 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms