RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 LETM2Q2VYF4 491 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 TUBB8Q3ZCM7 444 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 RUNDC3AQ59EK9 446 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 CCDC158Q5M9N0 1113 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 Q6ZSV7 163 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 SPATA2LQ8IUW3 424 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-218ENST00000553309 ELP5Q8TE02 316 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 HDAC7Q8WUI4 952 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 KTI12Q96EK9 354 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-218ENST00000553309 MEIS3Q99687 375 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 RPP25Q9BUL9 199 aaKnown RBP5.03□□□□□ -1.6
ATXN3-218ENST00000553309 SLCO5A1Q9H2Y9 848 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 KLHL31Q9H511 634 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 CLMPQ9H6B4 373 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-218ENST00000553309 LTB4R2Q9NPC1 389 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 TRPV5Q9NQA5 729 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 NYAP2Q9P242 653 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 BLOC1S6Q9UL45 172 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 FZD10Q9ULW2 581 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 ICKQ9UPZ9 632 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 NEUROG3Q9Y4Z2 214 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 BAZ2AQ9UIF9 1905 aaKnown RBP5.03□□□□□ -1.6
ATXN3-218ENST00000553309 CFAP46Q8IYW2 2715 aa5.03□□□□□ -1.6
ATXN3-218ENST00000553309 EVPLQ92817 2033 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 APC2O95996 2303 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 C2orf16Q68DN1 1984 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 GREB1LQ9C091 1923 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 TARSL2A2RTX5 802 aaKnown RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 FAM155BO75949 473 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 DDAH2O95865 285 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 ENO3P13929 434 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 HOXC13P31276 330 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 STIP1P31948 543 aaKnown RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 PNPLA4P41247 253 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 CLCNKBP51801 687 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 RPS6P62753 249 aaKnown RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 EGR4Q05215 589 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 SYCP1Q15431 976 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 FSCBQ5H9T9 825 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 ZNF484Q5JVG2 852 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 FBXO47Q5MNV8 452 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 C12orf60Q5U649 245 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 HSCBQ8IWL3 235 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 ZDHHC23Q8IYP9 409 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 GALNT15Q8N3T1 639 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 ZNF843Q8N446 348 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 MYCT1Q8N699 235 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 MRPL43Q8N983 215 aaKnown RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 SCAIQ8N9R8 606 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 DRAXINQ8NBI3 349 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 DEFB124Q8NES8 71 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 PPTC7Q8NI37 304 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC26Q8TAB7 109 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 SLC35F5Q8WV83 523 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC47Q96A33 483 aaKnown RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 SDCCAG3Q96C92 435 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 MED30Q96HR3 178 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 TEFMQ96QE5 360 aaKnown RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 C16orf70Q9BSU1 422 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 FAM167BQ9BTA0 163 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 EDEM2Q9BV94 578 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 PANK2Q9BZ23 570 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 CWH43Q9H720 699 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 ODF2LQ9ULJ1 636 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 DHDHQ9UQ10 334 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 MORC2Q9Y6X9 1032 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-218ENST00000553309 KALRNO60229 2985 aa5.02□□□□□ -1.61
ATXN3-218ENST00000553309 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 ZNF532Q9HCE3 1301 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 CNTNAP2Q9UHC6 1331 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 FREM2Q5SZK8 3169 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 hCG_1642624A0A1W2PR95 340 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 PRDM1O75626 825 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 MBD4O95243 580 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 CXCL14O95715 111 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 IGHDP01880 384 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 ICAM1P05362 532 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 CSF1P09603 554 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC159P0C7I6 412 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 ZNF806P0C7X5 589 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 MYZAPP0CAP1 466 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 HOXC8P31273 242 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 RFC1P35251 1148 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-218ENST00000553309 PRPHP41219 470 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 SLC1A4P43007 532 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 MVDP53602 400 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 RARSP54136 660 aaKnown RBP5.01□□□□□ -1.61
ATXN3-218ENST00000553309 CDH12P55289 794 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 DSC1Q08554 894 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 MGAT3Q09327 533 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 HTR4Q13639 388 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 THOC5Q13769 683 aaKnown RBP5.01□□□□□ -1.61
ATXN3-218ENST00000553309 KRT72Q14CN4 511 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 POSTNQ15063 836 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 RBBP5Q15291 538 aaKnown RBP5.01□□□□□ -1.61
ATXN3-218ENST00000553309 E2F5Q15329 346 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 TMEM266Q2M3C6 531 aa5.01□□□□□ -1.61
ATXN3-218ENST00000553309 HSDL1Q3SXM5 330 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms