RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CES3Q6UWW8 571 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 C11orf96Q7Z7L8 435 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 SLC9B2Q86UD5 537 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 C17orf82Q86X59 251 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 PIANPQ8IYJ0 282 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 PDIK1LQ8N165 341 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 BEND7Q8N7W2 519 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 WDR48Q8TAF3 677 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 MAPK15Q8TD08 544 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 SH3KBP1Q96B97 665 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 MFSD3Q96ES6 412 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 SNF8Q96H20 258 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 ERP44Q9BS26 406 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 TRIM31Q9BZY9 425 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 STN1Q9H668 368 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 PRDM8Q9NQV8 689 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 TBC1D29Q9UFV1 150 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 SNX24Q9Y343 169 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 UTP11Q9Y3A2 253 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 MAD1L1Q9Y6D9 718 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 SETXQ7Z333 2677 aaKnown RBP10.45□□□□□ -0.74
PTCH1-225ENST00000551845 ANKRD36A6QL64 1941 aa10.45□□□□□ -0.74
PTCH1-225ENST00000551845 IGLV3-16A0A075B6K0 115 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 KIR2DS5A0A0G2JLQ3 304 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 A0A0G2JNG1 304 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 C17orf113A0A1B0GUU1 675 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 PDZK1P1A8MUH7 402 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 KIR2DS3K7RE56 304 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 QSOX1O00391 747 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 OPA1O60313 960 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 VAPBO95292 243 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 PRB1P04280 392 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 POLBP06746 335 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 OR56A5P0C7T3 313 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 PRSS56P0CW18 603 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 XRCC1P18887 633 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ALDH4A1P30038 563 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ITGA8P53708 1063 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 B4GALNT1Q00973 533 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 C2orf54Q08AI8 447 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CALCOCO2Q13137 446 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 KIR2DS5Q14953 304 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 SMAD1Q15797 465 aaKnown RBP10.44□□□□□ -0.74
PTCH1-225ENST00000551845 DBN1Q16643 649 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 PLA2G4EQ3MJ16 856 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ANKRD20A4Q4UJ75 823 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 BCL7AQ4VC05 210 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 MRNIPQ6NTE8 343 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 HIBCHQ6NVY1 386 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ZNF449Q6P9G9 518 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ABRAXAS1Q6UWZ7 409 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 WASH2PQ6VEQ5 465 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 TMPRSS7Q7RTY8 843 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ZNF572Q7Z3I7 529 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-225ENST00000551845 TMEM135Q86UB9 458 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CCNJLQ8IV13 435 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 SFTPA2Q8IWL1 248 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CFAP206Q8IYR0 622 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CACTIN-AS1Q8N1I8 211 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 MPP5Q8N3R9 675 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 AVL9Q8NBF6 648 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 KYQ8NBH2 561 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 MNS1Q8NEH6 495 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 OR2L2Q8NH16 312 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 STAMBPL1Q96FJ0 436 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 SIGLEC10Q96LC7 697 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 LINC00615Q96LM1 132 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-225ENST00000551845 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CCDC3Q9BQI4 270 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 TRIM51Q9BSJ1 452 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CCM2Q9BSQ5 444 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 NAT9Q9BTE0 207 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 VPS37BQ9H9H4 285 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 WASH6PQ9NQA3 447 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 CATSPERZQ9NTU4 200 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 ACSL5Q9ULC5 683 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 RPS6KL1Q9Y6S9 549 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 RNF215Q9Y6U7 377 aa10.44□□□□□ -0.74
PTCH1-225ENST00000551845 PLXNB3Q9ULL4 1909 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 PPM1DO15297 605 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 RAD51CO43502 376 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 NDUFS3O75489 264 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 USP1O94782 785 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 SEC31AO94979 1220 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 MT-CO3P00414 261 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 VIPP01282 170 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 GSTM1P09488 218 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 RPL10P27635 214 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 HALP42357 657 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 MAGEA3P43357 314 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 GPR3P46089 330 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 TTPAP49638 278 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 PRLHRP49683 370 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 MAZP56270 477 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 ARL4CP56559 192 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 MRPS25P82663 173 aaKnown RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 INSM1Q01101 510 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-225ENST00000551845 GSTM4Q03013 218 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 DMPKQ09013 629 aa10.43□□□□□ -0.74
PTCH1-225ENST00000551845 THOC5Q13769 683 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms