RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	WISP2	O76076	250 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	EML2	O95834	649 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	NFKBIA	P25963	317 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	MSH2	P43246	934 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	CLK1	P49759	484 aa	Known RBP	4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	MMP15	P51511	669 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	RPS3A	P61247	264 aa	Known RBP	4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	TUBB2A	Q13885	445 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	MVP	Q14764	893 aa	Known RBP	4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	RAB6C	Q53S08	254 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	ACSM2B	Q68CK6	577 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	FAAP20	Q6NZ36	180 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	GTSCR1	Q86UQ5	136 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	GPALPP1	Q8IXQ4	340 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	NGEF	Q8N5V2	710 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	ARHGEF2	Q92974	986 aa	Known RBP	4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	WDFY2	Q96P53	400 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	TRIM51	Q9BSJ1	452 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	TUBB2B	Q9BVA1	445 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	RAB6C	Q9H0N0	254 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	SEMA6A	Q9H2E6	1030 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	ERVMER34-1	Q9H9K5	563 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	COQ3	Q9NZJ6	369 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	B3GALT5	Q9Y2C3	310 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	SMAD5-AS1	Q9Y6J3	95 aa		4.16	□□□□□ -1.74
CNOT2-222	ENST00000550155	MAGEB17	A8MXT2	336 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	TMEM189-UBE2V1	I3L0A0	370 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	TCERG1	O14776	1098 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	ZNF217	O75362	1048 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	CSPG5	O95196	566 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	CLPTM1	O96005	669 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	EIF2S1	P05198	315 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	CLEC3B	P05452	202 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	HMBS	P08397	361 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	CEACAM1	P13688	526 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	RPS18	P62269	152 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	UBE2V1	Q13404	147 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	TBCE	Q15813	527 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	MEP1A	Q16819	746 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	FFAR4	Q5NUL3	377 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	ISCA2	Q86U28	154 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	TSPAN33	Q86UF1	283 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	PLD3	Q8IV08	490 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	LYG1	Q8N1E2	194 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	PDILT	Q8N807	584 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	OR2T12	Q8NG77	320 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	TRPC4AP	Q8TEL6	797 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	RFFL	Q8WZ73	363 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	POMGNT1	Q8WZA1	660 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	SEMA4D	Q92854	862 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	WDR13	Q9H1Z4	485 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	SIX2	Q9NPC8	291 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	IRAK4	Q9NWZ3	460 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	TMEM98	Q9Y2Y6	226 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	RABGAP1	Q9Y3P9	1069 aa		4.15	□□□□□ -1.75
CNOT2-222	ENST00000550155	SMCHD1	A6NHR9	2005 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155		A0A1B0GVC2	190 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	OR2M5	A3KFT3	312 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	SLCO1B7	G3V0H7	640 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155		J3QR06	171 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	OGG1	O15527	345 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	RTN3	O95197	1032 aa	Predicted RBP	4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	H1F0	P07305	194 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	CKMT2	P17540	419 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	ANXA7	P20073	488 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	PSMA4	P25789	261 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	KRT9	P35527	623 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	GPR143	P51810	404 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	MFAP5	Q13361	173 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	PPHLN1	Q8NEY8	458 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	KCNG4	Q8TDN1	519 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	MRGPRD	Q8TDS7	321 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	PYGO2	Q9BRQ0	406 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	TRIM15	Q9C019	465 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	OLFML3	Q9NRN5	406 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	TRMT1	Q9NXH9	659 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	DNAJB4	Q9UDY4	337 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155	RASAL2	Q9UJF2	1139 aa		4.14	□□□□□ -1.75
CNOT2-222	ENST00000550155		A0A0J9YWU9	116 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	MEIOC	A2RUB1	952 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	EDN1	P05305	212 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	ATP1A3	P13637	1013 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	DPEP1	P16444	411 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	RGS2	P41220	211 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	BMX	P51813	675 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	GAGE2B	Q13066	116 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	MED22	Q15528	200 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	GTDC1	Q4AE62	458 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	GAGE2E	Q4V326	116 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	ARHGEF16	Q5VV41	709 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	GAGE2A	Q6NT46	116 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	NCEH1	Q6PIU2	408 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	SARM1	Q6SZW1	724 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	ZNF534	Q76KX8	674 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	PERP	Q96FX8	193 aa		4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.13	□□□□□ -1.75
CNOT2-222	ENST00000550155	POM121L2	Q96KW2	1035 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms