RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PGAM1P18669 254 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 XRCC1P18887 633 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 PAMP19021 973 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 AKT1P31749 480 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 PPARGP37231 505 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 GPR3P46089 330 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 TTPAP49638 278 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 SQSTM1Q13501 440 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 CRYMQ14894 314 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 INSCQ1MX18 579 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 FASTKD1Q53R41 847 aaKnown RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 DNAJC21Q5F1R6 531 aaKnown RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 PERM1Q5SV97 790 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 METRNLQ641Q3 311 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 CRTC3Q6UUV7 619 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 EFL1Q7Z2Z2 1120 aaKnown RBP11.7□□□□□ -0.54
PFDN5-208ENST00000549995 GALNT7Q86SF2 657 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 AMZ2Q86W34 360 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 LRRC6Q86X45 466 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 SFTPA2Q8IWL1 248 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 CNTN4Q8IWV2 1026 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 PDIK1LQ8N165 341 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 ARL14Q8N4G2 192 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 SLC37A2Q8TED4 501 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 ART4Q93070 314 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 SGF29Q96ES7 293 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 STAMBPL1Q96FJ0 436 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 RAB17Q9H0T7 212 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 DPEP2Q9H4A9 486 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 KLC4Q9NSK0 619 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 SAMD15Q9P1V8 674 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 KCNK6Q9Y257 313 aa11.7□□□□□ -0.54
PFDN5-208ENST00000549995 MED19A0JLT2 244 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 CCDC78A2IDD5 438 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 OPA1O60313 960 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 VAPBO95292 243 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 POLBP06746 335 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 IDSP22304 550 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 CAV1Q03135 178 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 RPA4Q13156 261 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 HIF1AQ16665 826 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 SPANXN3Q5MJ09 141 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 RNF187Q5TA31 235 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 MRNIPQ6NTE8 343 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 FAM83HQ6ZRV2 1179 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 TMPRSS12Q86WS5 348 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 CILP2Q8IUL8 1156 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 RBM12BQ8IXT5 1001 aaKnown RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 GALNT15Q8N3T1 639 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 DCBLD1Q8N8Z6 715 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 MNS1Q8NEH6 495 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 OR6P1Q8NGX9 317 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 PATE1Q8WXA2 126 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 LPGAT1Q92604 370 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 ZNF669Q96BR6 464 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 TTC1Q99614 292 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 TRIM56Q9BRZ2 755 aaKnown RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 FAM129AQ9BZQ8 928 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 VPS37BQ9H9H4 285 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 L2HGDHQ9H9P8 463 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 INTS10Q9NVR2 710 aaKnown RBP11.69□□□□□ -0.54
PFDN5-208ENST00000549995 RABGEF1Q9UJ41 708 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 ANAPC5Q9UJX4 755 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 ACSL5Q9ULC5 683 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 NEUROG3Q9Y4Z2 214 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 PRSS21Q9Y6M0 314 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 RPS6KL1Q9Y6S9 549 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 RNF215Q9Y6U7 377 aa11.69□□□□□ -0.54
PFDN5-208ENST00000549995 ADAMTS20P59510 1910 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 LILRA5A6NI73 299 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 PRMT5O14744 637 aaPredicted RBP11.68□□□□□ -0.54
PFDN5-208ENST00000549995 PPM1DO15297 605 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 MYF5P13349 255 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 PDX1P52945 283 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 TERF1P54274 439 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 EPHA4P54764 986 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 MAZP56270 477 aaKnown RBP11.68□□□□□ -0.54
PFDN5-208ENST00000549995 ARL4CP56559 192 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 NFE2L1Q14494 772 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 TCEA2Q15560 299 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 LONRF1Q17RB8 773 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 PLA2G4EQ3MJ16 856 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 GLE1Q53GS7 698 aaKnown RBP11.68□□□□□ -0.54
PFDN5-208ENST00000549995 CAPRIN2Q6IMN6 1127 aaKnown RBP11.68□□□□□ -0.54
PFDN5-208ENST00000549995 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 ZNF449Q6P9G9 518 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 CES3Q6UWW8 571 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 ZDHHC24Q6UX98 284 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 CENPUQ71F23 418 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 TAS2R42Q7RTR8 314 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 SPRED1Q7Z699 444 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 IGDCC3Q8IVU1 814 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 CLDN19Q8N6F1 224 aa11.68□□□□□ -0.54
PFDN5-208ENST00000549995 BEND7Q8N7W2 519 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms