RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 FAM228BP0C875 321 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 ACP5P13686 325 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 MAN1A1P33908 653 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 ANKRD20A8PQ5CZ79 823 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 COLEC12Q5KU26 742 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 HENMT1Q5T8I9 393 aaKnown RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 CEACAM20Q6UY09 585 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 CCHCR1Q8TD31 782 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 SYN2Q92777 582 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 HERPUD2Q9BSE4 406 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 EFHD1Q9BUP0 239 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 MLPHQ9BV36 600 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 STN1Q9H668 368 aaKnown RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 GPN2Q9H9Y4 310 aaPredicted RBP11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 APMAPQ9HDC9 416 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 PKD2L2Q9NZM6 624 aa11.85□□□□□ -0.51
TUBA1B-205ENST00000549870 KIR2DS5A0A0G2JLQ3 304 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 A0A0G2JNG1 304 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 A0A1W2PQJ5 194 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 RGSL1A5PLK6 1076 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 OR5K4A6NMS3 321 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 ANKRD66B4E2M5 251 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 KIR2DS3K7RE56 304 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 GRID2O43424 1007 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 NUAK1O60285 661 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 SERPING1P05155 500 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 F3P13726 295 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 SLC2A4P14672 509 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 MAPK9P45984 424 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 ABHD18Q0P651 414 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 KIR2DS5Q14953 304 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 PDK2Q15119 407 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 NFKBIBQ15653 356 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 SKIDA1Q1XH10 827 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 ALKBH5Q6P6C2 394 aaKnown RBP11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 CPNE8Q86YQ8 564 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 UNC5BQ8IZJ1 945 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 DTWD1Q8N5C7 304 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 ZNF670Q9BS34 389 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 TBC1D10AQ9BXI6 508 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 CARD9Q9H257 536 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 TRIT1Q9H3H1 467 aaKnown RBP11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 ATXN10Q9UBB4 475 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 CPNE7Q9UBL6 633 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 KLHL3Q9UH77 587 aa11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 TMEM184BQ9Y519 407 aaPredicted RBP11.84□□□□□ -0.51
TUBA1B-205ENST00000549870 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 POLR1CO15160 346 aaPredicted RBP11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 ADAM11O75078 769 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 STK17BO94768 372 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 BPNT1O95861 308 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 JCHAINP01591 159 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 MMP2P08253 660 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 PRKAR1AP10644 381 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 ZNF8P17098 575 aaPredicted RBP11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 GJC1P36383 396 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 CD86P42081 329 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 CLCNKAP51800 687 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 GBE1Q04446 702 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 IQCB1Q15051 598 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 KDELC2Q7Z4H8 507 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 PLXDC1Q8IUK5 500 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 CCDC13Q8IYE1 715 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 CCNYQ8ND76 341 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 CPLX3Q8WVH0 158 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 FAF2Q96CS3 445 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 EID2BQ96D98 161 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 HDAC11Q96DB2 347 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 ADGRE3Q9BY15 652 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 EPN3Q9H201 632 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 EPB41L1Q9H4G0 881 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 ZNF71Q9NQZ8 489 aaPredicted RBP11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 PPT2Q9UMR5 302 aa11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 POLR3KQ9Y2Y1 108 aaPredicted RBP11.83□□□□□ -0.52
TUBA1B-205ENST00000549870 PROSCO94903 275 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 SLC25A14O95258 325 aaPredicted RBP11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 DLGAP3O95886 979 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 XRCC1P18887 633 aaPredicted RBP11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 PBX1P40424 430 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 TAS2R40P59535 323 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 UBE2IP63279 158 aaKnown RBP11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 ZBED6P86452 979 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 SRSF1Q07955 248 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 CDC20Q12834 499 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 ZNF648Q5T619 568 aaPredicted RBP11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 ZNF385CQ66K41 422 aaPredicted RBP11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 PHYKPLQ8IUZ5 450 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 CNTD1Q8N815 330 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 AVL9Q8NBF6 648 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 GPR26Q8NDV2 337 aa11.82□□□□□ -0.52
TUBA1B-205ENST00000549870 APOBEC4Q8WW27 367 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms