RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 PPARGP37231 505 aaPredicted RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 MMP15P51511 669 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 NR0B1P51843 470 aaKnown RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 IKQ13123 557 aaPredicted RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 TMEM30BQ3MIR4 351 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 ZC2HC1CQ53FD0 456 aaPredicted RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 CEP85LQ5SZL2 805 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 CEACAM20Q6UY09 585 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 C1orf122Q6ZSJ8 110 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 ANO5Q75V66 913 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 RSRC2Q7L4I2 434 aaKnown RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 LONP2Q86WA8 852 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 GALNT13Q8IUC8 556 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 WDSUB1Q8N9V3 476 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 GSDMBQ8TAX9 411 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 FCAMRQ8WWV6 532 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 TM9SF4Q92544 642 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 LGALS12Q96DT0 336 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 GAD1Q99259 594 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 C1QTNF1Q9BXJ1 281 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 RAD21L1Q9H4I0 556 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 ZBTB20Q9HC78 741 aaPredicted RBP3.44□□□□□ -1.86
MRPL42-205ENST00000549561 KRT84Q9NSB2 600 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 SMC4Q9NTJ3 1288 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 PAG1Q9NWQ8 432 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 OGFRQ9NZT2 677 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 CMAHPQ9Y471 501 aa3.44□□□□□ -1.86
MRPL42-205ENST00000549561 TEX13DA0A0J9YY54 714 aaPredicted RBP3.43□□□□□ -1.86
MRPL42-205ENST00000549561 SMIM1B2RUZ4 78 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 BLOC1S5-TXNDC5H3BN57 136 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 TMEM189-UBE2V1I3L0A0 370 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 PCDH7O60245 1069 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ZG16O60844 167 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 PTP4A3O75365 173 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 BMP10O95393 424 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 GCNT3O95395 438 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 TSHBP01222 138 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 LIPFP07098 398 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ERVK-10P10266 1014 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 RXRGP48443 463 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 CDH8P55286 799 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 UBE2V1Q13404 147 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 MEP1AQ16819 746 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 DUOXA1Q1HG43 343 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 KRTAP27-1Q3LI81 207 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 SFMBT2Q5VUG0 894 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ZDHHC20Q5W0Z9 365 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 CHST9Q7L1S5 443 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 DGLUCYQ7Z3D6 616 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 MAATS1Q7Z4T9 603 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ADGRF2Q8IZF7 708 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 TMTC2Q8N394 836 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 STPG4Q8N801 248 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 CNBD1Q8NA66 436 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ZNF473Q8WTR7 871 aaKnown RBP3.43□□□□□ -1.86
MRPL42-205ENST00000549561 STAMBPL1Q96FJ0 436 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 LITAFQ99732 161 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ZHX3Q9H4I2 956 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 APOBEC3GQ9HC16 384 aaKnown RBP3.43□□□□□ -1.86
MRPL42-205ENST00000549561 SEPT11Q9NVA2 429 aaKnown RBP3.43□□□□□ -1.86
MRPL42-205ENST00000549561 PNMA2Q9UL42 364 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 EXO1Q9UQ84 846 aaKnown RBP3.43□□□□□ -1.86
MRPL42-205ENST00000549561 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ITIH6Q6UXX5 1313 aa3.43□□□□□ -1.86
MRPL42-205ENST00000549561 ZBTB43O43298 467 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 TPPPO94811 219 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 CGAP01215 116 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 GH2P01242 217 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 APOHP02749 345 aaPredicted RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 MSH3P20585 1137 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 CAPN3P20807 821 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 HOXC8P31273 242 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 GARSP41250 739 aaKnown RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 CD81P60033 236 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 AIMP2Q13155 320 aaKnown RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 PPIGQ13427 754 aaKnown RBP eCLIP3.42□□□□□ -1.862e-7■□□□□ 9.6
MRPL42-205ENST00000549561 MAPRE1Q15691 268 aaKnown RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 ZNF876PQ49A33 203 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 GALNT5Q7Z7M9 940 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 TRPT1Q86TN4 253 aaKnown RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 PTOV1Q86YD1 416 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 ARID3BQ8IVW6 561 aaPredicted RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 APLFQ8IW19 511 aaPredicted RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 MCEMP1Q8IX19 187 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 TEX11Q8IYF3 940 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 TMEM190Q8WZ59 177 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 SRSF8Q9BRL6 282 aaKnown RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 SEMA6AQ9H2E6 1030 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 SCRT2Q9NQ03 307 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 DDX43Q9NXZ2 648 aaKnown RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 DNAJB4Q9UDY4 337 aa3.42□□□□□ -1.86
MRPL42-205ENST00000549561 GREB1LQ9C091 1923 aaPredicted RBP3.42□□□□□ -1.86
MRPL42-205ENST00000549561 PLK4O00444 970 aa3.41□□□□□ -1.86
MRPL42-205ENST00000549561 NDUFS4O43181 175 aa3.41□□□□□ -1.86
MRPL42-205ENST00000549561 SYNCRIPO60506 623 aaKnown RBP3.41□□□□□ -1.86
MRPL42-205ENST00000549561 RB1P06400 928 aa3.41□□□□□ -1.86
MRPL42-205ENST00000549561 KRT19P08727 400 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms