RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GRIK2Q13002 908 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 KCNAB2Q13303 367 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 BRMS1LQ5PSV4 323 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 TWF2Q6IBS0 349 aaKnown RBP13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 DLEU7Q6UYE1 221 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ZFAND4Q86XD8 727 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 FNDC5Q8NAU1 212 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 OR13C4Q8NGS5 318 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 FBXO30Q8TB52 745 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 SDCCAG3Q96C92 435 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 HMCESQ96FZ2 354 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 CCDC90BQ9GZT6 254 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 AGO3Q9H9G7 860 aaKnown RBP13.57□□□□□ -0.24
HDAC7-228ENST00000548938 CDH9Q9ULB4 789 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 FAM50BQ9Y247 325 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 HS3ST4Q9Y661 456 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 COL4A4P53420 1690 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-228ENST00000548938 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 CDC7O00311 574 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 SLC10A3P09131 477 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 PIRTP0C851 137 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■■■ 28.2
HDAC7-228ENST00000548938 AAK1Q2M2I8 961 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 PGS1Q32NB8 556 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 PAQR3Q6TCH7 311 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 SCAIQ8N9R8 606 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 BLOC1S5Q8TDH9 187 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 KIAA1191Q96A73 305 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 PSD2Q9BQI7 771 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 ZIM2Q9NZV7 527 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 SNX5Q9Y5X3 404 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
HDAC7-228ENST00000548938 SLC1A7O00341 560 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 PCMT1P22061 227 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 RENBPP51606 427 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 LSM3P62310 102 aaKnown RBP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 PPP2R2BQ00005 443 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 RBBP7Q16576 425 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 C6orf136Q5SQH8 315 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 DSG4Q86SJ6 1040 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 MFSD4AQ8N468 514 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF555Q8NEP9 628 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 NDNFQ8TB73 568 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 STAG3L4Q8TBR4 150 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 FIG4Q92562 907 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 BTN2A3PQ96KV6 586 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 NODALQ96S42 347 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 TSPAN18Q96SJ8 248 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 RTP3Q9BQQ7 232 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 AARSD1Q9BTE6 412 aaKnown RBP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 OSBPL10Q9BXB5 764 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 RBMX2Q9Y388 322 aaKnown RBP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 ASB1Q9Y576 335 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 SMIM35A0A1B0GVV1 85 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 UBA6A0AVT1 1052 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 FAM92AA1XBS5 289 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 NPEPPSL1A6NEC2 478 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 NDUFS2O75306 463 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 OXSR1O95747 527 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 CHEK2O96017 543 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 GGT1P19440 569 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 ITIH1P19827 911 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 TGM1P22735 817 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 DGKQP52824 942 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 CDC42EP1Q00587 391 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 PRKG2Q13237 762 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 INAVAQ3KP66 663 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 MRNIPQ6NTE8 343 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 SPESP1Q6UW49 350 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 HBEGFQ99075 208 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 PAAF1Q9BRP4 392 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 FEM1AQ9BSK4 669 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 NUSAP1Q9BXS6 441 aaKnown RBP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 TMLHEQ9NVH6 421 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC7-228ENST00000548938 PCTPQ9UKL6 214 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 NEUROG3Q9Y4Z2 214 aa13.56□□□□□ -0.24
HDAC7-228ENST00000548938 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 F2P00734 622 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CST1P01037 141 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 UROSP10746 265 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 BMP4P12644 408 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 SETMARQ53H47 684 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 AGAP7PQ5VUJ5 663 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 DPP10Q8N608 796 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CDYL2Q8N8U2 506 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PJA1Q8NG27 643 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 RDH12Q96NR8 316 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms