RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 CHST11Q9NPF2 352 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 AGPAT4Q9NRZ5 378 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 LUZP4Q9P127 313 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 C5AR2Q9P296 337 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 CTTNBP2NLQ9P2B4 639 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 ATXN10Q9UBB4 475 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 COPG2Q9UBF2 871 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 LCMT1Q9UIC8 334 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 LNPEPQ9UIQ6 1025 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 PADI1Q9ULC6 663 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 DNAJC16Q9Y2G8 782 aa8.33□□□□□ -1.08
TROAP-208ENST00000548817 MN1Q10571 1320 aaPredicted RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 A0A1B0GUH1 482 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 VEGFDO43915 354 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 ZG16O60844 167 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 KIAA0754O94854 1291 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 PRLP01236 227 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 SLC4A1P02730 911 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 CYP1A2P05177 515 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 HLA-DQB2P05538 268 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 CD48P09326 243 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 ZNF7P17097 686 aaPredicted RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 BPIP17213 487 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 IL4RP24394 825 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 SSTR2P30874 369 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 HALP42357 657 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 GFERP55789 205 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 PDE1BQ01064 536 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 NIPAL4Q0D2K0 466 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 SEPT7Q16181 437 aaKnown RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 FIGNQ5HY92 759 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 ALS2CLQ60I27 953 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 PDPK2PQ6A1A2 396 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 IRGCQ6NXR0 463 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 KLHL35Q6PF15 583 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 PPP1R3BQ86XI6 285 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 TRAM1L1Q8N609 369 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 FAM71BQ8TC56 605 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 CPLX3Q8WVH0 158 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 UBE2Q2Q8WVN8 375 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 SYN2Q92777 582 aaPredicted RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 GLYATL1Q969I3 302 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 ELMO2Q96JJ3 720 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 RANBP9Q96S59 729 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 TIMM29Q9BSF4 260 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 XPO4Q9C0E2 1151 aaKnown RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 BRD8Q9H0E9 1235 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 ACTL8Q9H568 366 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 ARFGAP3Q9NP61 516 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 SHOC2Q9UQ13 582 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 B3GNT3Q9Y2A9 372 aa8.32□□□□□ -1.08
TROAP-208ENST00000548817 COPG1Q9Y678 874 aaKnown RBP8.32□□□□□ -1.08
TROAP-208ENST00000548817 ARGFXA6NJG6 315 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 KCNK1O00180 336 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 KLHL41O60662 606 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 KCNJ13O60928 360 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 SPAG6O75602 509 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 PROSCO94903 275 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 CDK14O94921 469 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 C9P02748 559 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 DRD2P14416 443 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 COX6B1P14854 86 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 ZNF28P17035 718 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 SLC19A1P41440 591 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 RPS15P62841 145 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 UBE2IP63279 158 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 CDK18Q07002 472 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 AP1B1Q10567 949 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 CHAF1BQ13112 559 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 GALNT3Q14435 633 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.31□□□□□ -1.08
TROAP-208ENST00000548817 ATP13A4Q4VNC1 1196 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 ZNF648Q5T619 568 aaPredicted RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 E4F1Q66K89 784 aaPredicted RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 ALKBH5Q6P6C2 394 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 ADGRG6Q86SQ4 1221 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 NT5DC3Q86UY8 548 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 CISD2Q8N5K1 135 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 GLIS1Q8NBF1 620 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 SIDT2Q8NBJ9 832 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 BRSK1Q8TDC3 778 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 CT55Q8WUE5 264 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 CTNNBL1Q8WYA6 563 aaPredicted RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 IQCDQ96DY2 449 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 NAP1L5Q96NT1 182 aaPredicted RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 WDR24Q96S15 920 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 SMAD5Q99717 465 aaKnown RBP8.31□□□□□ -1.08
TROAP-208ENST00000548817 CBX8Q9HC52 389 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 MAGEE1Q9HCI5 957 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 LHX9Q9NQ69 397 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 POT1Q9NUX5 634 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 GPR83Q9NYM4 423 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 UVRAGQ9P2Y5 699 aa8.31□□□□□ -1.08
TROAP-208ENST00000548817 TRIM10Q9UDY6 481 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms