RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 KCTD11Q693B1 232 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 PID1Q7Z2X4 250 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 CDKL3Q8IVW4 592 aaPredicted RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 LILRA3Q8N6C8 439 aaPredicted RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 BEND7Q8N7W2 519 aaPredicted RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 OR13C4Q8NGS5 318 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 CCDC110Q8TBZ0 833 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 AHCYL2Q96HN2 611 aaKnown RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 RMDN2Q96LZ7 410 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 SPATA13Q96N96 652 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 DESI2Q9BSY9 194 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 ZNF768Q9H5H4 540 aaKnown RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 AKAP7Q9P0M2 348 aaPredicted RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 TRHDEQ9UKU6 1024 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 PACSIN2Q9UNF0 486 aaPredicted RBP12.21□□□□□ -0.45
GCN1-204ENST00000548132 EFR3BQ9Y2G0 817 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 CAPN6Q9Y6Q1 641 aa12.21□□□□□ -0.45
GCN1-204ENST00000548132 NBASA2RRP1 2371 aa12.21□□□□□ -0.46
GCN1-204ENST00000548132 NUP210LQ5VU65 1888 aa12.21□□□□□ -0.46
GCN1-204ENST00000548132 TCRBV7S2A1N4TA0A589 114 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 H7C0C1 242 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 CCL22O00626 93 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 ZW10O43264 779 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 STK17BO94768 372 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 UBXN7O94888 489 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 TIAF1O95411 115 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 RBP3P10745 1247 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 F8A1P23610 371 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 ATP5OP48047 213 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 GEMP55040 296 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 GDF10P55107 478 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 EIF3EP60228 445 aaKnown RBP12.2□□□□□ -0.46
GCN1-204ENST00000548132 NFKB2Q00653 900 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 SPA17Q15506 151 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 DCAF12Q5T6F0 453 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 TMEM164Q5U3C3 297 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 UNC5BQ8IZJ1 945 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 CACNA2D3Q8IZS8 1091 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 AVL9Q8NBF6 648 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 CCDC112Q8NEF3 446 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 OR4K2Q8NGD2 314 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 SH3KBP1Q96B97 665 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 TEFMQ96QE5 360 aaKnown RBP12.2□□□□□ -0.46
GCN1-204ENST00000548132 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.2□□□□□ -0.46
GCN1-204ENST00000548132 FBXO8Q9NRD0 319 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 STARD5Q9NSY2 213 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 WDR70Q9NW82 654 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 SEMA5BQ9P283 1151 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 IL17BQ9UHF5 180 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 PCM1Q15154 2024 aa12.2□□□□□ -0.46
GCN1-204ENST00000548132 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 B8ZZF3 427 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 CAPN5O15484 640 aaPredicted RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 KCNN4O15554 427 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 LDB2O43679 373 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 VIPP01282 170 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 PRSS56P0CW18 603 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 OAS2P29728 719 aaKnown RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 PBLDP30039 288 aaPredicted RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 STAT5AP42229 794 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 ATP1A2P50993 1020 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 RPE65Q16518 533 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 BCL7AQ4VC05 210 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 LDLRAP1Q5SW96 308 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 ATP1A1-AS1Q5TC04 95 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 ITPRIPL1Q6GPH6 555 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 CERS6Q6ZMG9 384 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 TMTC1Q8IUR5 882 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 TGM7Q96PF1 710 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 NRTNQ99748 197 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 ASPSCR1Q9BZE9 553 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 EPHA6Q9UF33 1036 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 PSMD13Q9UNM6 376 aa12.19□□□□□ -0.46
GCN1-204ENST00000548132 MRPS18BQ9Y676 258 aaKnown RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 TNRC6AQ8NDV7 1962 aaKnown RBP12.19□□□□□ -0.46
GCN1-204ENST00000548132 IGLV3-16A0A075B6K0 115 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 IGHV5-51A0A0C4DH38 117 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 TRBV5-4A0A0C4DH59 114 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 PPFIA2O75334 1257 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 POP7O75817 140 aaKnown RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 ANXA9O76027 345 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 SRP72O76094 671 aaKnown RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 METTL18O95568 372 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 FTCDO95954 541 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 MTHFD1P11586 935 aaKnown RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 IDSP22304 550 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 PRLHRP49683 370 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 RWDD2BP57060 319 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 CDC20Q12834 499 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 ITGA9Q13797 1035 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 GTF2H3Q13889 308 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 SPARCL1Q14515 664 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 FNBP1LQ5T0N5 605 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 ZDHHC20Q5W0Z9 365 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms