RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LEPRP48357 1165 aaKnown RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 CLCNKAP51800 687 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 EPHA4P54764 986 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 HADHBP55084 474 aaKnown RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RAB15P59190 212 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 UBE2IP63279 158 aaKnown RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FOXM1Q08050 763 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 CBLBQ13191 982 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 CLCA4Q14CN2 919 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 SLC1A5Q15758 541 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 SLC14A2Q15849 920 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 SARM1Q6SZW1 724 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 TMEM26Q6ZUK4 368 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 BBS12Q6ZW61 710 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 PRICKLE2Q7Z3G6 844 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 GLT6D1Q7Z4J2 308 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 AMZ2Q86W34 360 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF547Q8IVP9 402 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 UNC5BQ8IZJ1 945 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 TTC30BQ8N4P2 665 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 BMPERQ8N8U9 685 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RASGEF1AQ8N9B8 481 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 AVL9Q8NBF6 648 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 ZNF398Q8TD17 642 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 BRSK1Q8TDC3 778 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RTP4Q96DX8 246 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 RBM41Q96IZ5 413 aaKnown RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 ELMO2Q96JJ3 720 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 QKIQ96PU8 341 aaKnown RBP eCLIP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 VPS35Q96QK1 796 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 VAT1Q99536 393 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FAM118BQ9BPY3 351 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 APOL2Q9BQE5 337 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 TIMM29Q9BSF4 260 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FICDQ9BVA6 458 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FSD1LQ9BXM9 530 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 EPB41L1Q9H4G0 881 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 APMAPQ9HDC9 416 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 SLC40A1Q9NP59 571 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 FBXO8Q9NRD0 319 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 OGFRQ9NZT2 677 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 HACD3Q9P035 362 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 IL17CQ9P0M4 197 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 NFKBIL1Q9UBC1 381 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 PILRAQ9UKJ1 303 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 PSMD13Q9UNM6 376 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 WDR37Q9Y2I8 494 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 HEMK1Q9Y5R4 338 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 EPN1Q9Y6I3 576 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-211ENST00000547950 BPTFQ12830 3046 aa6.59□□□□□ -1.35
SCAF11-211ENST00000547950 KALRNO60229 2985 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 GCN1Q92616 2671 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 LILRA5A6NI73 299 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 SOWAHDA6NJG2 315 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 OR2AG2A6NM03 316 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 HACD1B0YJ81 288 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 APOC4-APOC2K7ER74 178 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 STX7O15400 261 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NKX2-8O15522 239 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 KCNN4O15554 427 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 KIF1CO43896 1103 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 STK17BO94768 372 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NDUFA10O95299 355 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 IPO7O95373 1038 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 APOC2P02655 101 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PTMAP06454 111 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PRKAR1AP10644 381 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 HLA-DPA1P20036 260 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 MAP4P27816 1152 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 AKT1P31749 480 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 CA5AP35218 305 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 SPAM1P38567 509 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 HALP42357 657 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF75DP51815 510 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 GEMP55040 296 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 GFERP55789 205 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 EIF3EP60228 445 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 TMPRSS15P98073 1019 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NFKB2Q00653 900 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 OTUD4Q01804 1114 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 MPP3Q13368 585 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 XRCC4Q13426 336 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 OLIG2Q13516 323 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 GPR18Q14330 331 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 SPARCL1Q14515 664 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 PRPSAP1Q14558 356 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 NR6A1Q15406 480 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 LDLRAP1Q5SW96 308 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 FNBP1LQ5T0N5 605 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 GPRC6AQ5T6X5 926 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 AGAP9Q5VTM2 703 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 CACHD1Q5VU97 1274 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 ZDHHC20Q5W0Z9 365 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 C11orf63Q6NUN7 778 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 IRGCQ6NXR0 463 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 DARS2Q6PI48 645 aaKnown RBP6.58□□□□□ -1.36
SCAF11-211ENST00000547950 TMEM220Q6QAJ8 160 aa6.58□□□□□ -1.36
SCAF11-211ENST00000547950 ABRAXAS1Q6UWZ7 409 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms