RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 TUBA8Q9NY65 449 aaPredicted RBP4.38□□□□□ -1.71
CBX5-203ENST00000547872 COMMD10Q9Y6G5 202 aa4.38□□□□□ -1.71
CBX5-203ENST00000547872 ASCC3Q8N3C0 2202 aaKnown RBP4.38□□□□□ -1.71
CBX5-203ENST00000547872 ANK1P16157 1881 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 MAST4O15021 2626 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 FLNBO75369 2602 aaKnown RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 ENO4A6NNW6 628 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 TMEM189-UBE2V1I3L0A0 370 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 TRIM38O00635 465 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 FLRT2O43155 660 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 CCNT1O60563 726 aaKnown RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 DKC1O60832 514 aaKnown RBP eCLIP4.37□□□□□ -1.71
CBX5-203ENST00000547872 PPP6R2O75170 966 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 GJB3O75712 270 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 LARGE1O95461 756 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ALDOAP04075 364 aaKnown RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 ENO1P06733 434 aaKnown RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 GP1BBP13224 206 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 CPA1P15085 419 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ST6GAL1P15907 406 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 RPS6KB1P23443 525 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 GNA11P29992 359 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 GRK5P34947 590 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 IDUAP35475 653 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 OPRD1P41143 372 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 DPP6P42658 865 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 CPA2P48052 419 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 SLC12A2P55011 1212 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 SF3A3Q12874 501 aaKnown RBP eCLIP4.37□□□□□ -1.71
CBX5-203ENST00000547872 STIM1Q13586 685 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 KLF9Q13886 244 aaPredicted RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 ETFDHQ16134 617 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ZSCAN23Q3MJ62 389 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ANXA2RQ3ZCQ2 193 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 C10orf76Q5T2E6 689 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 PXDC1Q5TGL8 231 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ARMCX5Q6P1M9 558 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 SLC36A4Q6YBV0 504 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 RBM44Q6ZP01 1051 aaKnown RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 CCDC117Q8IWD4 279 aaPredicted RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 ZNF713Q8N859 430 aaPredicted RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 ARL14EPQ8N8R7 260 aaPredicted RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 ADPRHL1Q8NDY3 354 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 APPL2Q8NEU8 664 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 RDM1Q8NG50 284 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 OR10T2Q8NGX3 314 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 OLIG1Q8TAK6 271 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ETNPPLQ8TBG4 499 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 CCDC12Q8WUD4 166 aaPredicted RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 RSC1A1Q92681 617 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 EID2BQ96D98 161 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 GPR78Q96P69 363 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 SLC22A12Q96S37 553 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 TCHPQ9BT92 498 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 PI4K2AQ9BTU6 479 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ABHD14AQ9BUJ0 271 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 CCDC94Q9BW85 323 aaPredicted RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 GPR174Q9BXC1 333 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 ZMYND12Q9H0C1 365 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 BRD8Q9H0E9 1235 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 GLT8D2Q9H1C3 349 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 RNF7Q9UBF6 113 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 IPO11Q9UI26 975 aaKnown RBP4.37□□□□□ -1.71
CBX5-203ENST00000547872 RAB21Q9UL25 225 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 TBX20Q9UMR3 447 aa4.37□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3DA0A087WVF3 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3IA0A087WXS9 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3EA0A087X179 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3KA0A087X1G2 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 LOC105369274A0A096LPK9 316 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TRAV19A0A0A6YYK7 116 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 LOC102723532A0A0G2JNH3 316 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3BA6NDS4 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3FA6NER0 549 aaPredicted RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 MYMKA6NI61 221 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 C3orf70A6NLC5 250 aaPredicted RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 CCDC169A6NNP5 214 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 EFCAB8A8MWE9 144 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3LB9A6J9 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 M0QYT0 321 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ACKR2O00590 384 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ADAM10O14672 748 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 PPEF2O14830 753 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 EDIL3O43854 480 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ACTL6BO94805 426 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 KAT7O95251 611 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 NFATC1O95644 943 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 FGF19O95750 216 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 TBC1D3HP0C7X1 549 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 IRF1P10914 325 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 CIITAP33076 1130 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ACTN2P35609 894 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 ARL2P36404 184 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 SERPINF1P36955 418 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 CSNK1EP49674 416 aaKnown RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 ZNF84P51523 738 aa4.36□□□□□ -1.71
CBX5-203ENST00000547872 GALNT1Q10472 559 aaPredicted RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 BYSLQ13895 437 aaKnown RBP4.36□□□□□ -1.71
CBX5-203ENST00000547872 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms