RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 NPHS1O60500 1241 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 PCCBP05166 539 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 C7P10643 843 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 ENO3P13929 434 aaPredicted RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 GFAPP14136 432 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 NDUFV2P19404 249 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 SERPINB5P36952 375 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 ADPRHP54922 357 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 SGCGQ13326 291 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 GTF2H3Q13889 308 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 LRRC32Q14392 662 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 PLEKHS1Q5SXH7 462 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 PNCKQ6P2M8 343 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 FOXR1Q6PIV2 292 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 ADAMTSL4Q6UY14 1074 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 TRIM67Q6ZTA4 783 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 GPSM1Q86YR5 675 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 SYNPOQ8N3V7 929 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 HIC2Q96JB3 615 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 EPHX3Q9H6B9 360 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 POLMQ9NP87 494 aaPredicted RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 MBD1Q9UIS9 605 aaPredicted RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 TSR3Q9UJK0 312 aaKnown RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 ZFR2Q9UPR6 939 aaKnown RBP19.15■□□□□ 0.66
SKP2-208ENST00000546211 DNAJC16Q9Y2G8 782 aa19.15■□□□□ 0.66
SKP2-208ENST00000546211 LRRK1Q38SD2 2015 aa19.14■□□□□ 0.66
SKP2-208ENST00000546211 TBC1D3DA0A087WVF3 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3IA0A087WXS9 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3EA0A087X179 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3KA0A087X1G2 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3FA6NER0 549 aaPredicted RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 PRR23AA6NEV1 266 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3LB9A6J9 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 SGTAO43765 313 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 RNGTTO60942 597 aaKnown RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 ATG13O75143 517 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 CDK14O94921 469 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3HP0C7X1 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 CHRNB1P11230 501 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 IMPDH1P20839 514 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 PRLHRP49683 370 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 BOP1Q14137 746 aaKnown RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3GQ6DHY5 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3CQ6IPX1 549 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 FRA10AC1Q70Z53 315 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 WDR75Q8IWA0 830 aaKnown RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 TBC1D3Q8IZP1 549 aaPredicted RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 FBXO39Q8N4B4 442 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 PLA2G15Q8NCC3 412 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 PIWIL2Q8TC59 973 aaKnown RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 ELMO1Q92556 727 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 CNDP1Q96KN2 507 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 TMEM237Q96Q45 408 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 SORT1Q99523 831 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 C1QTNF7Q9BXJ2 289 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 FAM126AQ9BYI3 521 aaPredicted RBP19.14■□□□□ 0.65
SKP2-208ENST00000546211 TRIM39Q9HCM9 518 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 PRDM6Q9NQX0 595 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 MYO10Q9HD67 2058 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 F5P12259 2224 aa19.14■□□□□ 0.65
SKP2-208ENST00000546211 EYSQ5T1H1 3165 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 A0A1W2PQU0 124 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 SNUPNO95149 360 aaKnown RBP19.13■□□□□ 0.65
SKP2-208ENST00000546211 KITP10721 976 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 MTHFD2P13995 350 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 CTSCP53634 463 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 ZP2Q05996 745 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 HSPA14Q0VDF9 509 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 WSCD2Q2TBF2 565 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 NEK5Q6P3R8 708 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 TMEM220Q6QAJ8 160 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 Q6ZS52 159 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 ADGRG6Q86SQ4 1221 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 TRIM74Q86UV6 250 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 PTGR2Q8N8N7 351 aaPredicted RBP19.13■□□□□ 0.65
SKP2-208ENST00000546211 MAFAQ8NHW3 353 aaPredicted RBP19.13■□□□□ 0.65
SKP2-208ENST00000546211 RFWD2Q8NHY2 731 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 L3HYPDHQ96EM0 354 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 SHDQ96IW2 340 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 LENG8Q96PV6 779 aaPredicted RBP19.13■□□□□ 0.65
SKP2-208ENST00000546211 C1QTNF2Q9BXJ5 285 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 OSBPL6Q9BZF3 934 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 OR2AG1Q9H205 316 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 KDM4CQ9H3R0 1056 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 WNT16Q9UBV4 365 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 MARCOQ9UEW3 520 aaPredicted RBP19.13■□□□□ 0.65
SKP2-208ENST00000546211 DCTN4Q9UJW0 460 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 FBXL21Q9UKT6 434 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 ATG2BQ96BY7 2078 aa19.13■□□□□ 0.65
SKP2-208ENST00000546211 VEGFDO43915 354 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 SNX2O60749 519 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 PAK4O96013 591 aaPredicted RBP19.12■□□□□ 0.65
SKP2-208ENST00000546211 GABRG2P18507 467 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 ARRB2P32121 409 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 HERVK_113P63132 956 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 PFKFB4Q16877 469 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 MAP7D1Q3KQU3 841 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 SYTL3Q4VX76 610 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 TMEM259Q4ZIN3 620 aa19.12■□□□□ 0.65
SKP2-208ENST00000546211 ZNF678Q5SXM1 525 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms