RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 BCAT2O15382 392 aaPredicted RBP15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 GRID2O43424 1007 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 DNAJC6O75061 913 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 RFPL1O75677 317 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 PIAS1O75925 651 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC34A2O95436 690 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 APOA4P06727 396 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 CEACAM5P06731 702 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 ZNF37AP17032 561 aaPredicted RBP15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 CHRM3P20309 590 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 DGKAP23743 735 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 CA5AP35218 305 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC18A1P54219 525 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 TAS2R39P59534 338 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 SLC18A2Q05940 514 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 RBM20Q5T481 1227 aaKnown RBP15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 PARGQ86W56 976 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 TRAPPC5Q8IUR0 188 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 TMEFF1Q8IYR6 380 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 RGL4Q8IZJ4 473 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 CLDN19Q8N6F1 224 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 BEND7Q8N7W2 519 aaPredicted RBP15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 GLMNQ92990 594 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 TLCD1Q96CP7 247 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 TSNARE1Q96NA8 513 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 SMC6Q96SB8 1091 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 LGR4Q9BXB1 951 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 GPAMQ9HCL2 828 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 KLQ9UEF7 1012 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 SMG5Q9UPR3 1016 aaKnown RBP15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 MED16Q9Y2X0 877 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 ACOT9Q9Y305 439 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 PCDHGA5Q9Y5G8 931 aa15.77■□□□□ 0.12
PRPF40A-212ENST00000545856 KNL1Q8NG31 2342 aa15.77■□□□□ 0.11
PRPF40A-212ENST00000545856 PRSS38A1L453 326 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 MGAT4DA6NG13 374 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 TPP1O14773 563 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 HRO43593 1189 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 SGTAO43765 313 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 RASGRP1O95267 797 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 WISP3O95389 354 aaPredicted RBP15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 ZNF8P17098 575 aaPredicted RBP15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 CCT5P48643 541 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 CLCN7P51798 805 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 CLDN2P57739 230 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 ATP6V0D1P61421 351 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 BMPR2Q13873 1038 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 PDE1CQ14123 709 aaPredicted RBP15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 GBX1Q14549 363 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 KHDC1Q4VXA5 237 aaKnown RBP15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 TMEM220Q6QAJ8 160 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 TBC1D1Q86TI0 1168 aaPredicted RBP15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 AMZ2Q86W34 360 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 SYT12Q8IV01 421 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 ZBTB2Q8N680 514 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 OR13H1Q8NG92 308 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 OR2L2Q8NH16 312 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 SGF29Q96ES7 293 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 ATXN7L3BQ96GX2 97 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC6A18Q96N87 628 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 DPEP2Q9H4A9 486 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 CTNNAL1Q9UBT7 734 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 DCDC2Q9UHG0 476 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 ACSL5Q9ULC5 683 aa15.76■□□□□ 0.11
PRPF40A-212ENST00000545856 A0A096LPK6 155 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 TLR4O00206 839 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 DFNA5O60443 496 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 GLRA3O75311 464 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 NIPSNAP2O75323 286 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 AOAHP28039 575 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CTSCP53634 463 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 SIM2Q14190 667 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 FAM83EQ2M2I3 478 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 PYCR3Q53H96 274 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 RAPH1Q70E73 1250 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CD200R1Q8TD46 325 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 UBXN10Q96LJ8 280 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 OR2M4Q96R27 311 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 NDNQ99608 321 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 GPR21Q99679 349 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 OLFM1Q99784 485 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CENPHQ9H3R5 247 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 PILRBQ9UKJ0 227 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 INVSQ9Y283 1065 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 PRSS21Q9Y6M0 314 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 TMEM202A6NGA9 273 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 OR2AG2A6NM03 316 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 H0Y8X5 98 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 H3BM21 787 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 YKT6O15498 198 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 PRPF4O43172 522 aaKnown RBP eCLIP15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 MTX2O75431 263 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 GPC4O75487 556 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 C2P06681 752 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC35E2BP0CK96 405 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CRHR1P34998 444 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 DHPSP49366 369 aaPredicted RBP15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 CDKN2DP55273 166 aa15.75■□□□□ 0.11
PRPF40A-212ENST00000545856 C21orf59P57076 290 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms