RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CNGA2Q16280 664 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 LONRF1Q17RB8 773 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 ARHGAP17Q68EM7 881 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MTFR2Q6P444 385 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 TRIM72Q6ZMU5 477 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MEX3BQ6ZN04 569 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 PAQR9Q6ZVX9 377 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 PARGQ86W56 976 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 RBM12BQ8IXT5 1001 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 FUKQ8N0W3 1084 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 Q8N9G6 341 aaPredicted RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 SIMC1Q8NDZ2 872 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 SLC2A14Q8TDB8 520 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 PANX2Q96RD6 677 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MYOCQ99972 504 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 MIS12Q9H081 205 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 SDCBP2Q9H190 292 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 FBXO44Q9H4M3 255 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 CARS2Q9HA77 564 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 PDE7BQ9NP56 450 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 PNPLA8Q9NP80 782 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 NLRC4Q9NPP4 1024 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 FAM49BQ9NUQ9 324 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 SPASTQ9UBP0 616 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 HESX1Q9UBX0 185 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 LSM7Q9UK45 103 aaKnown RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 TMEM184BQ9Y519 407 aaPredicted RBP6.71□□□□□ -1.34
LDHA-223ENST00000545215 RPS6KL1Q9Y6S9 549 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 FER1L5A0AVI2 2057 aa6.71□□□□□ -1.34
LDHA-223ENST00000545215 PIPSLA2A3N6 862 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 LRRC53A6NM62 1247 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 NOTOA8MTQ0 251 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 B4E171 279 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 FOXN3O00409 490 aaPredicted RBP6.7□□□□□ -1.34
LDHA-223ENST00000545215 EPHB6O15197 1021 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 SLC31A1O15431 190 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 PHF1O43189 567 aaPredicted RBP6.7□□□□□ -1.34
LDHA-223ENST00000545215 PROM1O43490 865 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 AP1G1O43747 822 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CREB3O43889 395 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CREG1O75629 220 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 BEST1O76090 585 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 SERPING1P05155 500 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 DLDP09622 509 aaKnown RBP6.7□□□□□ -1.34
LDHA-223ENST00000545215 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ZDHHC11BP0C7U3 371 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 FAM200BP0CF97 657 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 SETSIPP0DME0 302 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CD19P15391 556 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ADORA2BP29275 332 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CASP14P31944 242 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 DRD3P35462 400 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 SPAM1P38567 509 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 USP8P40818 1118 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 TSPAN7P41732 249 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 KLK7P49862 253 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 NEK3P51956 506 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 THOP1P52888 689 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 RAD23BP54727 409 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 MAP3K7CLP57077 242 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CLDN2P57739 230 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 GOLGA8FQ08AF8 430 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 GOLGA8DPQ0D2H9 430 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 TOR2AQ5JU69 321 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 C9orf64Q5T6V5 341 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ANKS6Q68DC2 871 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 LCLAT1Q6UWP7 414 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 GCNT7Q6ZNI0 430 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CEP128Q6ZU80 1094 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CHST15Q7LFX5 561 aaPredicted RBP6.7□□□□□ -1.34
LDHA-223ENST00000545215 ADIPOR2Q86V24 386 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 PIM3Q86V86 326 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 TMEM200AQ86VY9 491 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ANKRD52Q8NB46 1076 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 KYQ8NBH2 561 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 SLC4A11Q8NBS3 891 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 MSANTD4Q8NCY6 345 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ZMIZ2Q8NF64 920 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 PHOSPHO1Q8TCT1 267 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 TTC17Q96AE7 1141 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 MBD6Q96DN6 1003 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 RTP4Q96DX8 246 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CYFIP2Q96F07 1278 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 TBATAQ96M53 351 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 SMOQ99835 787 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 UBXN6Q9BZV1 441 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 DCLK3Q9C098 648 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ING2Q9H160 280 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 LIME1Q9H400 295 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 TLR8Q9NR97 1041 aaKnown RBP6.7□□□□□ -1.34
LDHA-223ENST00000545215 COMMD8Q9NX08 183 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 IL37Q9NZH6 218 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 ASH2LQ9UBL3 628 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 HMGXB4Q9UGU5 601 aa6.7□□□□□ -1.34
LDHA-223ENST00000545215 CHD3Q12873 2000 aaKnown RBP6.69□□□□□ -1.34
LDHA-223ENST00000545215 FAM92AA1XBS5 289 aa6.69□□□□□ -1.34
LDHA-223ENST00000545215 TLCD2A6NGC4 264 aa6.69□□□□□ -1.34
LDHA-223ENST00000545215 A6NNZ2 444 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms