RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 PRKCGP05129 697 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ABCB1P08183 1280 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 HAPLN1P10915 354 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 NCK1P16333 377 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 IL12AP29459 219 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 STC1P52823 247 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 AP1S1P61966 158 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 SULT2A1Q06520 285 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CAMK2GQ13555 558 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 NCF4Q15080 339 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 AP5B1Q2VPB7 878 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 PDCD4Q53EL6 469 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 MPPE1Q53F39 396 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 SULT1C3Q6IMI6 304 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 UBE2R2Q712K3 238 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 RPS27LQ71UM5 84 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 AKAP14Q86UN6 197 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 UMODL1-AS1Q8N2C9 162 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CBR4Q8N4T8 237 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ARL10Q8N8L6 244 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 OR2T12Q8NG77 320 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 TDRD1Q9BXT4 1180 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 IPPKQ9H8X2 491 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS50-220ENST00000544910 PTTG2Q9NZH5 202 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 FLRT1Q9NZU1 646 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 H2AFY2Q9P0M6 372 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 ENOPH1Q9UHY7 261 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 MAPRE3Q9UPY8 281 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 TLL2Q9Y6L7 1015 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 FAM149AA5PLN7 773 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 IMPDH2P12268 514 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CCNA2P20248 432 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 RRM2P31350 389 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ACLYP53396 1101 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ERVK-8P63133 956 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 LRRC74AQ0VAA2 488 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 C1DQ13901 141 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 ZNF423Q2M1K9 1284 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 PAQR3Q6TCH7 311 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 RALGPS2Q86X27 583 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 CPNE9Q8IYJ1 553 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 LIX1Q8N485 282 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 PACRGLQ8N7B6 248 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 SUN5Q8TC36 379 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 GRIN3AQ8TCU5 1115 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 LRRC58Q96CX6 371 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CDKN2AIPNLQ96HQ2 116 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 BRD9Q9H8M2 597 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 TMEM39AQ9NV64 488 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CRNNQ9UBG3 495 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 ADGRE2Q9UHX3 823 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ILVBLA1L0T0 632 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 H0YC42 278 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 H7C0S8 307 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ARPC2O15144 300 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 GRM6O15303 877 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CA12O43570 354 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ALOX12P18054 663 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 FDXRP22570 491 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 PSMB9P28065 219 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 RPS9P46781 194 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 CCT3P49368 545 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 STARD3Q14849 445 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ALFQ53S48 1182 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 OGFRL1Q5TC84 451 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 ZNF621Q6ZSS3 439 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ADCK2Q7Z695 626 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ATL1Q8WXF7 558 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 UPF1Q92900 1129 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS50-220ENST00000544910 MS4A4AQ96JQ5 239 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 C11orf84Q9BUA3 381 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 HPS4Q9NQG7 708 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CFAP97Q9P2B7 532 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 EVLQ9UI08 416 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 SIX3O95343 332 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 CLDN9O95484 217 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ALOX15P16050 662 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 CAPGP40121 348 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 GNPDA1P46926 289 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 HSPA7P48741 367 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 RPL34P49207 117 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 CDKN2DP55273 166 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CCL23P55773 120 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 RAB25P57735 213 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 EEFSECP57772 596 aaKnown RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 TUBA3CQ13748 450 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 PPP1R3AQ16821 1122 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 KANK2Q63ZY3 851 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 MZT2BQ6NZ67 158 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 RNF19BQ6ZMZ0 732 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 CYP4Z1Q86W10 505 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 OVCA2Q8WZ82 227 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 PLEKHA8Q96JA3 519 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 C6orf62Q9GZU0 229 aaPredicted RBP5.72□□□□□ -1.49
VPS50-220ENST00000544910 POLR1BQ9H9Y6 1135 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 TMLHEQ9NVH6 421 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 GIN1Q9NXP7 522 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 ZIM2Q9NZV7 527 aa5.72□□□□□ -1.49
VPS50-220ENST00000544910 VPS4AQ9UN37 437 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms