RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 OR5K4A6NMS3 321 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 EFCAB8A8MWE9 144 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 KIR2DS3K7RE56 304 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 CD3EAPO15446 510 aaKnown RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 USP1O94782 785 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 VAPBO95292 243 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 VCLP18206 1134 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 ITGA8P53708 1063 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 UBE2IP63279 158 aaKnown RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 MRPS25P82663 173 aaKnown RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 KIR2DS5Q14953 304 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 TYSND1Q2T9J0 566 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 FASTKD1Q53R41 847 aaKnown RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 CCDC157Q569K6 752 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 SPRED1Q7Z699 444 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 GALNT15Q8N3T1 639 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 DCBLD1Q8N8Z6 715 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.78■□□□□ 0.6
DDX55-211ENST00000544429 WDR83Q9BRX9 315 aaKnown RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 SARS2Q9NP81 518 aaKnown RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 SCHIP1Q9P0W5 487 aaPredicted RBP18.78■□□□□ 0.6
DDX55-211ENST00000544429 KLK13Q9UKR3 277 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 DNAJC16Q9Y2G8 782 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 WDR37Q9Y2I8 494 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 PRSS21Q9Y6M0 314 aa18.78■□□□□ 0.6
DDX55-211ENST00000544429 CEP295Q9C0D2 2601 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 AKAP13Q12802 2813 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 A0A1W2PQM1 296 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 OR1I1O60431 355 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 GSTM1P09488 218 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 SLC2A4P14672 509 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 XRCC1P18887 633 aaPredicted RBP18.77■□□□□ 0.6
DDX55-211ENST00000544429 IDSP22304 550 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 GPR3P46089 330 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 GSTM4Q03013 218 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 DHX9Q08211 1270 aaKnown RBP18.77■□□□□ 0.6
DDX55-211ENST00000544429 NFE2L1Q14494 772 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 AARS2Q5JTZ9 985 aaKnown RBP18.77■□□□□ 0.6
DDX55-211ENST00000544429 HES3Q5TGS1 186 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 CASC4Q6P4E1 433 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 CCNI2Q6ZMN8 369 aaPredicted RBP18.77■□□□□ 0.6
DDX55-211ENST00000544429 WDR48Q8TAF3 677 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 MAPK15Q8TD08 544 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 STAMBPL1Q96FJ0 436 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 OSGEPL1Q9H4B0 414 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 PLAC1Q9HBJ0 212 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 GRHL1Q9NZI5 618 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 SAMD15Q9P1V8 674 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 WHRNQ9P202 907 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 ZNF624Q9P2J8 865 aaPredicted RBP18.77■□□□□ 0.6
DDX55-211ENST00000544429 RPS6KL1Q9Y6S9 549 aa18.77■□□□□ 0.6
DDX55-211ENST00000544429 ASPMQ8IZT6 3477 aa18.77■□□□□ 0.59
DDX55-211ENST00000544429 BHMG1C9JSJ3 638 aaPredicted RBP18.76■□□□□ 0.59
DDX55-211ENST00000544429 E7ESA3 106 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 QSOX1O00391 747 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 B4GAT1O43505 415 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 SNX2O60749 519 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 TCEA3O75764 348 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 SPINK2P20155 84 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 TTPAP49638 278 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 CLDN6P56747 220 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 SQSTM1Q13501 440 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 CAMK2BQ13554 666 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 CLCA4Q14CN2 919 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 IGDCC3Q8IVU1 814 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 KIF18AQ8NI77 898 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 HM13Q8TCT9 377 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 ZNF592Q92610 1267 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 PWWP2AQ96N64 755 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 TTC1Q99614 292 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 EBNA1BP2Q99848 306 aaKnown RBP18.76■□□□□ 0.59
DDX55-211ENST00000544429 CCM2Q9BSQ5 444 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 TRIM31Q9BZY9 425 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 P2RY12Q9H244 342 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 ANGPTL2Q9UKU9 493 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 ACSL5Q9ULC5 683 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 SNX24Q9Y343 169 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 MSRB2Q9Y3D2 182 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 TEX264Q9Y6I9 313 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 FAM169AQ9Y6X4 670 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 WDFY3Q8IZQ1 3526 aa18.76■□□□□ 0.59
DDX55-211ENST00000544429 NDC80O14777 642 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 BANF1O75531 89 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 PAMP19021 973 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 RPL10P27635 214 aaKnown RBP18.75■□□□□ 0.59
DDX55-211ENST00000544429 SLC19A1P41440 591 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 PDX1P52945 283 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 DRG2P55039 364 aaKnown RBP18.75■□□□□ 0.59
DDX55-211ENST00000544429 HHEXQ03014 270 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 LDB1Q86U70 411 aaPredicted RBP18.75■□□□□ 0.59
DDX55-211ENST00000544429 CCNJLQ8IV13 435 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 PDIK1LQ8N165 341 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 LILRA3Q8N6C8 439 aaPredicted RBP18.75■□□□□ 0.59
DDX55-211ENST00000544429 AVL9Q8NBF6 648 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 BBOF1Q8ND07 529 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 SEC14L1Q92503 715 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 ZNF669Q96BR6 464 aaPredicted RBP18.75■□□□□ 0.59
DDX55-211ENST00000544429 LRRC39Q96DD0 335 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 TCF12Q99081 682 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 NAT9Q9BTE0 207 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms