RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 LSM8O95777 96 aaKnown RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 TRUB2O95900 331 aaKnown RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 F9P00740 461 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 SERPINC1P01008 464 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PENKP01210 267 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 CISD3P0C7P0 127 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 TDGF1P13385 188 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 DESP17661 470 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 NTSR1P30989 418 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 CCR1P32246 355 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 CDH5P33151 784 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PTGS2P35354 604 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 POLE2P56282 527 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 MAPKAPK3Q16644 382 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 BEAN1Q3B7T3 259 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 DCAF6Q58WW2 860 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 CERCAMQ5T4B2 595 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 FCRL6Q6DN72 434 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 LAIR1Q6GTX8 287 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 MRNIPQ6NTE8 343 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PPP1R2P3Q6NXS1 205 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 TRIM72Q6ZMU5 477 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ASCL5Q7RTU5 278 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 GATAD2AQ86YP4 633 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 FAM217AQ8IXS0 508 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 DEFB106AQ8N104 65 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 WDTC1Q8N5D0 677 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ALLCQ8N6M5 410 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ATG16L2Q8NAA4 619 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 GLIS1Q8NBF1 620 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 SUMF1Q8NBK3 374 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 DNAJB14Q8TBM8 379 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 DQX1Q8TE96 717 aaKnown RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 WFIKKN2Q8TEU8 576 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 CLEC4CQ8WTT0 213 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 FAM136AQ96C01 138 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PTCD3Q96EY7 689 aaKnown RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PLEKHG4BQ96PX9 1271 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ERGIC2Q96RQ1 377 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 ACP6Q9NPH0 428 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 OBP2BQ9NPH6 170 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 FAM207AQ9NSI2 230 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PLK2Q9NYY3 685 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.49□□□□□ -1.535e-9■■□□□ 12.4
CPSF7-220ENST00000541963 VSX1Q9NZR4 365 aaPredicted RBP5.49□□□□□ -1.53
CPSF7-220ENST00000541963 STAP1Q9ULZ2 295 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 PLA2G4CQ9UP65 541 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 USP22Q9UPT9 525 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 TRIOO75962 3097 aa5.49□□□□□ -1.53
CPSF7-220ENST00000541963 MYOFQ9NZM1 2061 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SYCE3A1L190 88 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 F5H5T6 163 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 MSI1O43347 362 aaKnown RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SYNCRIPO60506 623 aaKnown RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 TSPAN3O60637 253 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 TBL1XO60907 577 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 LRP3O75074 770 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF217O75362 1048 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 GFPT2O94808 682 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 PEX11BO96011 259 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 IGLV3-27P01718 113 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 FYNP06241 537 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ATP5BP06576 529 aaKnown RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 RETP07949 1114 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 HOXB2P14652 356 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 FERP16591 822 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF18P17022 549 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 POLR2EP19388 210 aaKnown RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 TNFAIP3P21580 790 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 GABRB3P28472 473 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 EPHA3P29320 983 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 DPP6P42658 865 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 MATKP42679 507 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 GABRB2P47870 512 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CCT5P48643 541 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ST8SIA6P61647 398 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 CDR2Q01850 454 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 GABPB1Q06547 395 aaPredicted RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SPARCL1Q14515 664 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 KCNAB1Q14722 419 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 C4orf46Q504U0 113 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 RABGAP1LQ5R372 815 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SYPL2Q5VXT5 272 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ANO7Q6IWH7 933 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 DPY19L2P1Q6NXN4 242 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 TLDC1Q6P9B6 456 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SLC36A4Q6YBV0 504 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 FAM183BPQ6ZVS7 135 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 SLC26A9Q7LBE3 791 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 TMPRSS9Q7Z410 1059 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 KCTD20Q7Z5Y7 419 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ANKS1BQ7Z6G8 1248 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 IL17RCQ8NAC3 791 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 HJURPQ8NCD3 748 aaPredicted RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF397Q8NF99 534 aaPredicted RBP5.48□□□□□ -1.53
CPSF7-220ENST00000541963 IL17DQ8TAD2 202 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 NACC2Q96BF6 587 aa5.48□□□□□ -1.53
CPSF7-220ENST00000541963 PDLIM2Q96JY6 352 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms