RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 NODALQ96S42 347 aa15.22■□□□□ 0.03
HMGA2-210ENST00000541363 ISCA1Q9BUE6 129 aa15.22■□□□□ 0.03
HMGA2-210ENST00000541363 ERVK-5Q9HDB9 667 aa15.22■□□□□ 0.03
HMGA2-210ENST00000541363 C14orf105Q9NVL8 296 aa15.22■□□□□ 0.03
HMGA2-210ENST00000541363 SMPD3Q9NY59 655 aaPredicted RBP15.22■□□□□ 0.03
HMGA2-210ENST00000541363 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3DA0A087WVF3 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3IA0A087WXS9 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3EA0A087X179 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3KA0A087X1G2 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3FA6NER0 549 aaPredicted RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3LB9A6J9 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 FESP07332 822 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3HP0C7X1 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TGFB3P10600 412 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ZNF16P17020 682 aaPredicted RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 VARSP26640 1264 aaKnown RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3GQ6DHY5 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3CQ6IPX1 549 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TBC1D3Q8IZP1 549 aaPredicted RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 OR52J3Q8NH60 311 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 PMEPA1Q969W9 287 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 NECAB3Q96P71 396 aaPredicted RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ULBP1Q9BZM6 244 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 UCK2Q9BZX2 261 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 GDAP2Q9NXN4 497 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 UGGT1Q9NYU2 1555 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 H7C2Y5 167 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 PDYNP01213 254 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ITGA2BP08514 1039 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 HDCP19113 662 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ERVK-9P63128 1117 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ST3GAL4Q11206 333 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 DUSP4Q13115 394 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 SCGB2A2Q13296 93 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TOR1AIP1Q5JTV8 583 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TNS4Q8IZW8 715 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 AENQ8WTP8 325 aaKnown RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ERVK-11Q9UQG0 969 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 CPNE3O75131 537 aaKnown RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TRUB2O95900 331 aaKnown RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 VIPP01282 170 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 CCKBRP32239 447 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 C3orf33Q6P1S2 294 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 CFAP206Q8IYR0 622 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ACAT2Q9BWD1 397 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 NR2E1Q9Y466 385 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ABHD2P08910 425 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 PET100P0DJ07 73 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 SLC2A2P11168 524 aaPredicted RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 KIR3DL1P43629 444 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 GCNT1Q02742 428 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 SEMA3CQ99985 751 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 S100A14Q9HCY8 104 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 EFCAB9A8MZ26 197 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 THEGLP0DJG4 465 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
HMGA2-210ENST00000541363 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 ALLCQ8N6M5 410 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 TAMM41Q96BW9 452 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 STRA6Q9BX79 667 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 BRD7Q9NPI1 651 aa15.21■□□□□ 0.03
HMGA2-210ENST00000541363 OR6C70A6NIJ9 312 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 SLC1A2P43004 574 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 PITRM1Q5JRX3 1037 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 DNAJB7Q7Z6W7 309 aaPredicted RBP15.21■□□□□ 0.02
HMGA2-210ENST00000541363 FAM129CQ86XR2 697 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 PHC3Q8NDX5 983 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 OR6K6Q8NGW6 343 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 GTPBP3Q969Y2 492 aaKnown RBP15.21■□□□□ 0.02
HMGA2-210ENST00000541363 MFSD3Q96ES6 412 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 OSER1Q9NX31 292 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.02
HMGA2-210ENST00000541363 FXYD6-FXYD2A0A087WZ82 144 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 BUD23O43709 281 aaKnown RBP15.21■□□□□ 0.02
HMGA2-210ENST00000541363 AVPR1BP47901 424 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 PLEKHG4Q58EX7 1191 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 TXNRD3Q86VQ6 643 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 FXYD6Q9H0Q3 95 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 B3GAT2Q9NPZ5 323 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 SNX15Q9NRS6 342 aa15.21■□□□□ 0.02
HMGA2-210ENST00000541363 MYH8P13535 1937 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 DAPL1A0PJW8 107 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 CASRP41180 1078 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 KCNJ2P63252 427 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 NFIXQ14938 502 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 WSCD2Q2TBF2 565 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 IFT27Q9BW83 186 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 OTOL1A6NHN0 477 aaPredicted RBP15.2■□□□□ 0.02
HMGA2-210ENST00000541363 SSX4O60224 188 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 PRKD3O94806 890 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 SLC16A8O95907 504 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 BACE1P56817 501 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 NRG1Q02297 640 aaPredicted RBP15.2■□□□□ 0.02
HMGA2-210ENST00000541363 ADAM15Q13444 863 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 BRMS1LQ5PSV4 323 aa15.2■□□□□ 0.02
HMGA2-210ENST00000541363 PTF1AQ7RTS3 328 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms