RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ARNTLO00327 626 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 BTN3A1O00481 513 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ALPLP05186 524 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 FCGR1AP12314 374 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 NCF1P14598 390 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ELK4P28324 431 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SOX11P35716 441 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SREBF2Q12772 1141 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 FUT11Q495W5 492 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ABRAXAS1Q6UWZ7 409 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 IFNEQ86WN2 208 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 CHPFQ8IZ52 775 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SLC22A17Q8WUG5 538 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 CYGBQ8WWM9 190 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 CNDP2Q96KP4 475 aaKnown RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 MBOAT4Q96T53 435 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 IKZF5Q9H5V7 419 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 UTS2RQ9UKP6 389 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF510Q9Y2H8 683 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SEC24DO94855 1032 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SERPINF2P08697 491 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 KCNK10P57789 538 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 PRKCZQ05513 592 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 RAD51Q06609 339 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 GPR162Q16538 588 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 PTPRNQ16849 979 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ANKRD34AQ69YU3 496 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ANKRD26P1Q6NSI1 321 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 HID1Q8IV36 788 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF583Q96ND8 569 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 TSEN34Q9BSV6 310 aaKnown RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 LRRC3Q9BY71 257 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 UBA6A0AVT1 1052 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 H0YAE9 185 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SEC14L2O76054 403 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 CDH1P12830 882 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF157P51786 506 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF235Q14590 738 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 TXNDC11Q6PKC3 985 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 SBSNQ6UWP8 590 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 RALGPS2Q86X27 583 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 DHRSXQ8N5I4 330 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 MAGEE2Q8TD90 523 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 EXOC2Q96KP1 924 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 MUS81Q96NY9 551 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 DCUN1D5Q9BTE7 237 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 HGH1Q9BTY7 390 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 RC3H2Q9HBD1 1191 aaKnown RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 TRMT13Q9NUP7 481 aaKnown RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 FAIMQ9NVQ4 179 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 RNF186Q9NXI6 227 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 IFT80Q9P2H3 777 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-212ENST00000541284 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 PCDHB5Q9Y5E4 795 aa9.42□□□□□ -0.9
CNOT4-212ENST00000541284 RNF103-CHMP3A0A140T963 221 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GAPDHSO14556 408 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 PRAMEF12O95522 483 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 NPPAP01160 153 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GGT1P19440 569 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 SCNN1BP51168 640 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 NUP107P57740 925 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GNA12Q03113 381 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 TRAF3Q13114 568 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 PLCL1Q15111 1095 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 TGFBIQ15582 683 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GEN1Q17RS7 908 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GPRIN3Q6ZVF9 776 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 LZICQ8WZA0 190 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 ACDQ96AP0 544 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 CCDC115Q96NT0 180 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 YTHDF1Q9BYJ9 559 aaKnown RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 POLR1BQ9H9Y6 1135 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 PLGRKTQ9HBL7 147 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 ELOVL2Q9NXB9 296 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 MTMR11A4FU01 709 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 IQCF5A8MTL0 148 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 H7C0S8 307 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 SNAP91O60641 907 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 MLYCDO95822 493 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 LDLRP01130 860 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 ASGR1P07306 291 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 G6PDP11413 515 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 PKMP14618 531 aaKnown RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 HOXB9P17482 250 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 ARSFP54793 590 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 MTPNP58546 118 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 NFE2Q16621 373 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 C10orf120Q5SQS8 335 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 CCNYL2Q5T2Q4 361 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 TMEM214Q6NUQ4 689 aaKnown RBP9.41□□□□□ -0.9
CNOT4-212ENST00000541284 GLT6D1Q7Z4J2 308 aa9.41□□□□□ -0.9
CNOT4-212ENST00000541284 ZNF354CQ86Y25 554 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms