RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 TIAF1O95411 115 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 CA5AP35218 305 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 SPAM1P38567 509 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 TNNT3P45378 269 aaPredicted RBP23.51■■□□□ 1.35
LEMD3-203ENST00000541171 CTSCP53634 463 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 DNASE1L3Q13609 305 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 KCNAB1Q14722 419 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 RPE65Q16518 533 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.51■■□□□ 1.35
LEMD3-203ENST00000541171 SIRPB2Q5JXA9 342 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 TMEM220Q6QAJ8 160 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 KDELC1Q6UW63 502 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 BZW1Q7L1Q6 419 aaKnown RBP23.51■■□□□ 1.35
LEMD3-203ENST00000541171 RASGEF1AQ8N9B8 481 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 SIDT2Q8NBJ9 832 aaKnown RBP23.51■■□□□ 1.35
LEMD3-203ENST00000541171 BLOC1S5Q8TDH9 187 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 CT55Q8WUE5 264 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 TRABDQ9H4I3 376 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 PDE7BQ9NP56 450 aa23.51■■□□□ 1.35
LEMD3-203ENST00000541171 ZNF106Q9H2Y7 1883 aaKnown RBP23.51■■□□□ 1.35
LEMD3-203ENST00000541171 IGHV5-51A0A0C4DH38 117 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 LOC285095A0A1B0GVY8 99 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 OR2AG2A6NM03 316 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 SPOPO43791 374 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 CST8O60676 142 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 CREG1O75629 220 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 MT-ND3P03897 115 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 FOLR1P15328 257 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 PECAM1P16284 738 aaPredicted RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 COMTP21964 271 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 FECHP22830 423 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 PBLDP30039 288 aaPredicted RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 WASHC5Q12768 1159 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 TUBB3Q13509 450 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 TRIM14Q14142 442 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 PLCL1Q15111 1095 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 FAM83HQ6ZRV2 1179 aaPredicted RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 ZC3H18Q86VM9 953 aaKnown RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 TEX19Q8NA77 164 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 ZCCHC2Q9C0B9 1178 aaKnown RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 RAB33BQ9H082 229 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 NHEJ1Q9H9Q4 299 aaPredicted RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 LHX9Q9NQ69 397 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 IL17CQ9P0M4 197 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 KLHL8Q9P2G9 620 aaPredicted RBP23.5■■□□□ 1.35
LEMD3-203ENST00000541171 RARRES3Q9UL19 164 aa23.5■■□□□ 1.35
LEMD3-203ENST00000541171 GLYATL1P3A0A0U1RQE8 302 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 KCNJ13O60928 360 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 CDKN2BP42772 138 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 SLC1A1P43005 524 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 NR2C2P49116 596 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 ARL4DP49703 201 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 TFDP2Q14188 446 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 NFE2L1Q14494 772 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 LDLRAP1Q5SW96 308 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 ZDHHC20Q5W0Z9 365 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 PWWP2BQ6NUJ5 590 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 CYB5D1Q6P9G0 228 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 CERS6Q6ZMG9 384 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 PID1Q7Z2X4 250 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 GLT6D1Q7Z4J2 308 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 IPMKQ8NFU5 416 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 UBXN4Q92575 508 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 MRGPRX2Q96LB1 330 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 MAP3K3Q99759 626 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 ANP32EQ9BTT0 268 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 ABHD10Q9NUJ1 306 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 IMP3Q9NV31 184 aaKnown RBP23.49■■□□□ 1.35
LEMD3-203ENST00000541171 TLK1Q9UKI8 766 aa23.49■■□□□ 1.35
LEMD3-203ENST00000541171 CFAP20Q9Y6A4 193 aaKnown RBP23.49■■□□□ 1.35
LEMD3-203ENST00000541171 GOLGA6L3A6NEY3 463 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 MTSS1O43312 755 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 RFPL1O75677 317 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 NTRK1P04629 796 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 EBLN1P0CF75 366 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 GPRC6AQ5T6X5 926 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 TCTN3Q6NUS6 607 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 KLHL35Q6PF15 583 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 ASB18Q6ZVZ8 466 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 HAUS1Q96CS2 278 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 OXNAD1Q96HP4 312 aaPredicted RBP23.48■■□□□ 1.35
LEMD3-203ENST00000541171 SLC41A2Q96JW4 573 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 RUFY1Q96T51 708 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 AKIRIN1Q9H9L7 192 aaPredicted RBP23.48■■□□□ 1.35
LEMD3-203ENST00000541171 HACD3Q9P035 362 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 MAN2B2Q9Y2E5 1009 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 PCDHGA6Q9Y5G7 932 aa23.48■■□□□ 1.35
LEMD3-203ENST00000541171 CBFA2T2O43439 604 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 TPM1P09493 284 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 ADCY2Q08462 1091 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 DMPKQ09013 629 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 XRCC4Q13426 336 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 PTPRCAPQ14761 206 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 SLC1A5Q15758 541 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 FAM199XQ6PEV8 388 aaPredicted RBP23.47■■□□□ 1.35
LEMD3-203ENST00000541171 SPOCD1Q6ZMY3 1216 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 DET1Q7L5Y6 550 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 ZNF567Q8N184 647 aa23.47■■□□□ 1.35
LEMD3-203ENST00000541171 BEND7Q8N7W2 519 aaPredicted RBP23.47■■□□□ 1.35
LEMD3-203ENST00000541171 DDHD1Q8NEL9 900 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms