RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CD1CP29017 333 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 HALP42357 657 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 PRLHRP49683 370 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 PDX1P52945 283 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 INHBCP55103 352 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ETF1P62495 437 aaKnown RBP9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ACVR1Q04771 509 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 DMPKQ09013 629 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 NR1D2Q14995 579 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CLCA4Q14CN2 919 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ST3GAL2Q16842 350 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.06□□□□□ -0.96
SNHG1-215ENST00000540904 AGAP9Q5VTM2 703 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 LYPLAL1Q5VWZ2 237 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CASC4Q6P4E1 433 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CES3Q6UWW8 571 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ABRAXAS1Q6UWZ7 409 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 SYT10Q6XYQ8 523 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 PIM3Q86V86 326 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CAND1Q86VP6 1230 aaKnown RBP9.06□□□□□ -0.96
SNHG1-215ENST00000540904 MPP5Q8N3R9 675 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CLDN19Q8N6F1 224 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 OR2L2Q8NH16 312 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 OR4L1Q8NH43 312 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 PEX13Q92968 403 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 SH3KBP1Q96B97 665 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 CXorf40BQ96DE9 158 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 AHCYL2Q96HN2 611 aaKnown RBP9.06□□□□□ -0.96
SNHG1-215ENST00000540904 TMEM74Q96NL1 305 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 TTC1Q99614 292 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 NUDT22Q9BRQ3 303 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ZMYND15Q9H091 742 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 EPB41L5Q9HCM4 733 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ZNF624Q9P2J8 865 aaPredicted RBP9.06□□□□□ -0.96
SNHG1-215ENST00000540904 RNF14Q9UBS8 474 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 PCYOX1Q9UHG3 505 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 WDR37Q9Y2I8 494 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 ENTPD2Q9Y5L3 495 aa9.06□□□□□ -0.96
SNHG1-215ENST00000540904 GOLGA4Q13439 2230 aaKnown RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 IGHV1OR21-1A0A087WYE8 117 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 PRAMEF33A0A0G2JMD5 474 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 KLHL33A6NCF5 533 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 CPNE6O95741 557 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 VIPP01282 170 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 XRCC1P18887 633 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SLC19A1P41440 591 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 NSG1P42857 185 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 PTGIRP43119 386 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 MAPK9P45984 424 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 UBE2IP63279 158 aaKnown RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 GABREP78334 506 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 GPLD1P80108 840 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 DR1Q01658 176 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 PTK6Q13882 451 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 RTP5Q14D33 572 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 FASTKD1Q53R41 847 aaKnown RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 C3orf38Q5JPI3 329 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 PHF19Q5T6S3 580 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 METRNLQ641Q3 311 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 FOXR1Q6PIV2 292 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 WASH2PQ6VEQ5 465 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 CERS6Q6ZMG9 384 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 TMPRSS9Q7Z410 1059 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 LDB1Q86U70 411 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 PPIL6Q8IXY8 311 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 CFAP206Q8IYR0 622 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 LILRA3Q8N6C8 439 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 OTUD6BQ8N6M0 293 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 MCUQ8NE86 351 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 OR10G6Q8NH81 332 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 HM13Q8TCT9 377 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SLCO2A1Q92959 643 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 GRAMD1AQ96CP6 724 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 MFSD3Q96ES6 412 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 LINC00615Q96LM1 132 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SERPINB12Q96P63 405 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 CCM2Q9BSQ5 444 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 KIFC1Q9BW19 673 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 TBC1D10AQ9BXI6 508 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 STRADBQ9C0K7 418 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 WWP1Q9H0M0 922 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SEMA6CQ9H3T2 930 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 VPS37BQ9H9H4 285 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 XAB2Q9HCS7 855 aaKnown RBP9.05□□□□□ -0.96
SNHG1-215ENST00000540904 WASH6PQ9NQA3 447 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 TREX1Q9NSU2 369 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 CATSPERZQ9NTU4 200 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 POT1Q9NUX5 634 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SAMD15Q9P1V8 674 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 ANAPC5Q9UJX4 755 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 ZMIZ1Q9ULJ6 1067 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SOX13Q9UN79 622 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 SATB2Q9UPW6 733 aa9.05□□□□□ -0.96
SNHG1-215ENST00000540904 CFAP20Q9Y6A4 193 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms