RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SMIM14Q96QK8 99 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 TBL1YQ9BQ87 522 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 RBSNQ9H1K0 784 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 GOLPH3Q9H4A6 298 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ASB8Q9H765 288 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 PDE7BQ9NP56 450 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 SLC40A1Q9NP59 571 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 PRDM8Q9NQV8 689 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 DNAJC16Q9Y2G8 782 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 PRKAB1Q9Y478 270 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 PLEKHM1Q9Y4G2 1056 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 SPO11Q9Y5K1 396 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 ST14Q9Y5Y6 855 aa10.21□□□□□ -0.77
CDCA3-208ENST00000540683 LOC400499M0QZD8 3231 aa10.21□□□□□ -0.78
CDCA3-208ENST00000540683 C17orf113A0A1B0GUU1 675 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 MGAT4DA6NG13 374 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF891A8MT65 544 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 C9orf172C9J069 976 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 IFRD1O00458 451 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 EFSO43281 561 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 KALRNO60229 2985 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 RASSF9O75901 435 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 FGF3P11487 239 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 HOXB3P14651 431 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 CSF2RBP32927 897 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 PLOD1Q02809 727 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 ABHD18Q0P651 414 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 PRKAA1Q13131 559 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 COL9A2Q14055 689 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 PLCL1Q15111 1095 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 LLGL1Q15334 1064 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 CHRNA6Q15825 494 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 SKIDA1Q1XH10 827 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 BCL7AQ4VC05 210 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 SNAP47Q5SQN1 464 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 LYPLAL1Q5VWZ2 237 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 TMEM220Q6QAJ8 160 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 PRSS42Q7Z5A4 293 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 ESX1Q8N693 406 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 OR8K5Q8NH50 307 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 CRELD1Q96HD1 420 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 LINC00615Q96LM1 132 aaPredicted RBP10.2□□□□□ -0.78
CDCA3-208ENST00000540683 C9orf72Q96LT7 481 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 COPS8Q99627 209 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 TMUB1Q9BVT8 246 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 ADNPQ9H2P0 1102 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 PCDHB3Q9Y5E6 796 aa10.2□□□□□ -0.78
CDCA3-208ENST00000540683 GRID2IPA4D2P6 1211 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 E7EVH7 732 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 AURKAO14965 403 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ARHGAP6O43182 974 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 POP7O75817 140 aaKnown RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 AP2A2O94973 939 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 AGTP01019 485 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 C9P02748 559 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 CCL4P13236 92 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 RPL10P27635 214 aaKnown RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 PSMB4P28070 264 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ADRA1AP35348 466 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 FDFT1P37268 417 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 SLC19A1P41440 591 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 MARCKSL1P49006 195 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 LMAN1P49257 510 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ACY1Q03154 408 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ADCY2Q08462 1091 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 RPA4Q13156 261 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 SEPT7Q16181 437 aaKnown RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 CRTC2Q53ET0 693 aaPredicted RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 TMTC4Q5T4D3 741 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 GPRC6AQ5T6X5 926 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 METRNLQ641Q3 311 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 RAD9BQ6WBX8 426 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 B4GALNT4Q76KP1 1039 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 NLRP9Q7RTR0 991 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 TMPRSS9Q7Z410 1059 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 SNX20Q7Z614 316 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 OOSP2Q86WS3 158 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ZFAND4Q86XD8 727 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF547Q8IVP9 402 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 SFTPA2Q8IWL1 248 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 OR4K2Q8NGD2 314 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 OR2L2Q8NH16 312 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 STYXQ8WUJ0 223 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 TSSK1BQ9BXA7 367 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ZNF768Q9H5H4 540 aaKnown RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 GPN2Q9H9Y4 310 aaPredicted RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 FANCEQ9HB96 536 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 SYTL2Q9HCH5 934 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ARFGAP3Q9NP61 516 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 HOMER3Q9NSC5 361 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 TUBD1Q9UJT1 453 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 KCND3Q9UK17 655 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ZKSCAN5Q9Y2L8 839 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 PCDHGA4Q9Y5G9 962 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 HEMK1Q9Y5R4 338 aaPredicted RBP10.19□□□□□ -0.78
CDCA3-208ENST00000540683 ARL5AQ9Y689 179 aa10.19□□□□□ -0.78
CDCA3-208ENST00000540683 A8MU76 341 aa10.18□□□□□ -0.78
CDCA3-208ENST00000540683 H7C0S8 307 aa10.18□□□□□ -0.78
CDCA3-208ENST00000540683 PFDN6O15212 129 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms