RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 HS6ST1O60243 411 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GCATO75600 419 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 NTRK1P04629 796 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 NFICP08651 508 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 MSL3P1P0C860 447 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PCNAP12004 261 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 NCAM1P13591 858 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GMPRP36959 345 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PPP5CP53041 499 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 FAM189BP81408 668 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GRSF1Q12849 480 aaKnown RBP eCLIP8.6□□□□□ -1.03
DDB1-217ENST00000540166 AMHR2Q16671 573 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 INAVAQ3KP66 663 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 FAM98BQ52LJ0 330 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 SPANXN3Q5MJ09 141 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 RBM48Q5RL73 367 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 TMEM236Q5W0B7 351 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 BTBD8Q5XKL5 378 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 DENND5AQ6IQ26 1287 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TRPV3Q8NET8 790 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 DNAJB14Q8TBM8 379 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 VPS39Q96JC1 886 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 SIGLEC10Q96LC7 697 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 VPS35Q96QK1 796 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 HOPXQ9BPY8 73 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 CCM2LQ9NUG4 571 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PAQR5Q9NXK6 330 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 KCNK1O00180 336 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TPPPO94811 219 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 SUPT7LO94864 414 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 LTFP02788 710 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 IL7RP16871 459 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GRK3P35626 688 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GRM5P41594 1212 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 LEPRP48357 1165 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 SPCS2Q15005 226 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 SLC36A3Q495N2 470 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 ARFGAP1Q8N6T3 406 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PCDH19Q8TAB3 1148 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 MOCOSQ96EN8 888 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 LGMNQ99538 433 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 RUBCNLQ9H714 662 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 EMCNQ9ULC0 261 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TCAF1Q9Y4C2 921 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 SMIM28A0A1B0GU29 152 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 A8MV72 311 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 PRLP01236 227 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 IFI30P13284 250 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 HDCP19113 662 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TPSB2P20231 275 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 INPP1P49441 399 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 VBP1P61758 197 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 MRPL28Q13084 256 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 CAPRIN1Q14444 709 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 TPSAB1Q15661 275 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 RAB6CQ53S08 254 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PIWIL4Q7Z3Z4 852 aaKnown RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 FAM20CQ8IXL6 584 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 DEPDC4Q8N2C3 294 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 FBXL6Q8N531 539 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 RDH11Q8TC12 318 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 LRRC20Q8TCA0 184 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 LINC01599Q8WXQ3 324 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TUBGCP3Q96CW5 907 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 ELMO2Q96JJ3 720 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TWNKQ96RR1 684 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PEBP4Q96S96 227 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 TBCBQ99426 244 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 ELOVL4Q9GZR5 314 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 RAB6CQ9H0N0 254 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 SP140LQ9H930 580 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 LRRC4Q9HBW1 653 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GMIPQ9P107 970 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
DDB1-217ENST00000540166 XPR1Q9UBH6 696 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 HMGXB4Q9UGU5 601 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 CYTH4Q9UIA0 394 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
DDB1-217ENST00000540166 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 SOAT2O75908 522 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 ALX3O95076 343 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 EPN2O95208 641 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 RASAL1O95294 804 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 SOX6P35712 828 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 CCR10P46092 362 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 ZNF132P52740 706 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 CLDN10P78369 228 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 SLC10A2Q12908 348 aaPredicted RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 DSC3Q14574 896 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 CA9Q16790 459 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 FSTL4Q6MZW2 842 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 RALGPS2Q86X27 583 aaPredicted RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 GRAMD2AQ8IUY3 354 aa8.59□□□□□ -1.03
DDB1-217ENST00000540166 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
DDB1-217ENST00000540166 KCTD4Q8WVF5 259 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms