RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 KIR2DS5Q14953 304 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 NR1D2Q14995 579 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 ZNF658BQ4V348 819 aaPredicted RBP21.69■■□□□ 1.06
TRIM65-202ENST00000540128 METRNLQ641Q3 311 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 DHRS13Q6UX07 377 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 CHCHD4Q8N4Q1 142 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 CLDN19Q8N6F1 224 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 BEND7Q8N7W2 519 aaPredicted RBP21.69■■□□□ 1.06
TRIM65-202ENST00000540128 NAT14Q8WUY8 206 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 PATE1Q8WXA2 126 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 LRRC39Q96DD0 335 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 TRIM56Q9BRZ2 755 aaKnown RBP21.69■■□□□ 1.06
TRIM65-202ENST00000540128 RAB17Q9H0T7 212 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 DNAJC16Q9Y2G8 782 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 MAD1L1Q9Y6D9 718 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 RNF215Q9Y6U7 377 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 FAM169AQ9Y6X4 670 aa21.69■■□□□ 1.06
TRIM65-202ENST00000540128 FAM221BA6H8Z2 402 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 QSOX1O00391 747 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 SNX2O60749 519 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 PGAM1P18669 254 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 ARL4CP56559 192 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 SHC2P98077 582 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 CCDC157Q569K6 752 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 NEPROQ6NW34 567 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 XKR5Q6UX68 686 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 FAM83HQ6ZRV2 1179 aaPredicted RBP21.68■■□□□ 1.06
TRIM65-202ENST00000540128 TMPRSS7Q7RTY8 843 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 TMPRSS12Q86WS5 348 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 CCNJLQ8IV13 435 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 CCDC74AQ96AQ1 378 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 ZNF669Q96BR6 464 aaPredicted RBP21.68■■□□□ 1.06
TRIM65-202ENST00000540128 TCF12Q99081 682 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 CCM2Q9BSQ5 444 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 OSGEPL1Q9H4B0 414 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 GRHL1Q9NZI5 618 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 LRIT1Q9P2V4 623 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 UTP11Q9Y3A2 253 aaKnown RBP21.68■■□□□ 1.06
TRIM65-202ENST00000540128 PRSS21Q9Y6M0 314 aa21.68■■□□□ 1.06
TRIM65-202ENST00000540128 PIKFYVEQ9Y2I7 2098 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 E7ESA3 106 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 OR1I1O60431 355 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 TTC4O95801 387 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 POLBP06746 335 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 BRAFP15056 766 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 XRCC1P18887 633 aaPredicted RBP21.67■■□□□ 1.06
TRIM65-202ENST00000540128 INSM1Q01101 510 aaPredicted RBP21.67■■□□□ 1.06
TRIM65-202ENST00000540128 CALCOCO2Q13137 446 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 NFE2L1Q14494 772 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 HIF1AQ16665 826 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 TYSND1Q2T9J0 566 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 BBS9Q3SYG4 887 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.67■■□□□ 1.06
TRIM65-202ENST00000540128 CDCP2Q5VXM1 449 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 MRNIPQ6NTE8 343 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 IGDCC3Q8IVU1 814 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 AVL9Q8NBF6 648 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 MAPK15Q8TD08 544 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 SLC37A2Q8TED4 501 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 SEC14L1Q92503 715 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 PWWP2AQ96N64 755 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 CCDC3Q9BQI4 270 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 VPS37BQ9H9H4 285 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 SARS2Q9NP81 518 aaKnown RBP21.67■■□□□ 1.06
TRIM65-202ENST00000540128 SCHIP1Q9P0W5 487 aaPredicted RBP21.67■■□□□ 1.06
TRIM65-202ENST00000540128 RABGEF1Q9UJ41 708 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 ACSL5Q9ULC5 683 aa21.67■■□□□ 1.06
TRIM65-202ENST00000540128 CTAGE15A4D2H0 777 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 PPM1DO15297 605 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 CTAGE8P0CG41 777 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 GPR3P46089 330 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 FOXC1Q12948 553 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 SDCCAG8Q86SQ7 713 aaPredicted RBP21.66■■□□□ 1.06
TRIM65-202ENST00000540128 LDB1Q86U70 411 aaPredicted RBP21.66■■□□□ 1.06
TRIM65-202ENST00000540128 CTAGE6Q86UF2 777 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 CTAGE4Q8IX94 777 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 GALNT15Q8N3T1 639 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 WDR48Q8TAF3 677 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 HM13Q8TCT9 377 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 ART4Q93070 314 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 LRRC1Q9BTT6 524 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 DPH5Q9H2P9 285 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 WDR37Q9Y2I8 494 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 TEX264Q9Y6I9 313 aa21.66■■□□□ 1.06
TRIM65-202ENST00000540128 TRBV23OR9-2A0A075B6M9 112 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 BHMG1C9JSJ3 638 aaPredicted RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 F8W8V4 182 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 NTN3O00634 580 aaPredicted RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 PRMT5O14744 637 aaPredicted RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 BANF1O75531 89 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 TOP3BO95985 862 aaKnown RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 OGNP20774 298 aaKnown RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 RPS3P23396 243 aaKnown RBP eCLIP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 ELK3P41970 407 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 UBE2IP63279 158 aaKnown RBP21.65■■□□□ 1.06
TRIM65-202ENST00000540128 CAV1Q03135 178 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 LONRF1Q17RB8 773 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 C8orf74Q6P047 294 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 SLC9B2Q86UD5 537 aa21.65■■□□□ 1.06
TRIM65-202ENST00000540128 LRRC6Q86X45 466 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms