RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 IFT81Q8WYA0 676 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 HDAC10Q969S8 669 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TSACCQ96A04 125 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 STAMBPL1Q96FJ0 436 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CDKN2AIPNLQ96HQ2 116 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 DNAJC1Q96KC8 554 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TBATAQ96M53 351 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 SERPINB12Q96P63 405 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CDC6Q99741 560 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 ORAI3Q9BRQ5 295 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TRIM51Q9BSJ1 452 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CARD6Q9BX69 1037 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 FAM129AQ9BZQ8 928 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 FOXP3Q9BZS1 431 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CCDC68Q9H2F9 335 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 DPEP2Q9H4A9 486 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 STN1Q9H668 368 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 MRM3Q9HC36 420 aaKnown RBP6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CHRAC1Q9NRG0 131 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TXNDC16Q9P2K2 825 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 TMEM98Q9Y2Y6 226 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 PCDHGB2Q9Y5G2 931 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CSNK1G3Q9Y6M4 447 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 RPS6KL1Q9Y6S9 549 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 DGKBQ9Y6T7 804 aa6.4□□□□□ -1.38
SNHG1-212ENST00000539975 CUL9Q8IWT3 2517 aa6.4□□□□□ -1.39
SNHG1-212ENST00000539975 NYNRINQ9P2P1 1898 aaKnown RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CKAP5Q14008 2032 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 FAM237BA0A1B0GVD1 139 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 TCRBV7S3A2A0A539 114 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 TMEM202A6NGA9 273 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 MROH6A6NGR9 719 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 H7C0S8 307 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 FANCGO15287 622 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CD3EAPO15446 510 aaKnown RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 GRID2O43424 1007 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 UGT1A9O60656 530 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 KCNJ13O60928 360 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 SDC3O75056 442 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 AVILO75366 819 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 VAPBO95292 243 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 IVLP07476 585 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 OR56A5P0C7T3 313 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ACPPP15309 386 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ZNF7P17097 686 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 PGAM1P18669 254 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 UGT1A6P19224 532 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 UGT1A1P22309 533 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 UGT1A4P22310 534 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 MCM3P25205 808 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 EPHA8P29322 1005 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 UGT1A3P35503 534 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 UGT1A5P35504 534 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 GRIA1P42261 906 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 HALP42357 657 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 NSG1P42857 185 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 RPL21P46778 160 aaKnown RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ZNF140P52738 457 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LIMK1P53667 647 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CRADDP78560 199 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 DAB2P98082 770 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 IL9RQ01113 521 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 PDIA2Q13087 525 aaKnown RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 DOC2BQ14184 412 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 PTPRCAPQ14761 206 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LONRF1Q17RB8 773 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ATP13A5Q4VNC0 1218 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 SPANXN3Q5MJ09 141 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 RNF187Q5TA31 235 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 HIBCHQ6NVY1 386 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LVRNQ6Q4G3 990 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 RFLNAQ6ZTI6 216 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CHST15Q7LFX5 561 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LRRTM4Q86VH4 590 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CAND1Q86VP6 1230 aaKnown RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CCDC25Q86WR0 208 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 SPATS2Q86XZ4 545 aaKnown RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LMNTD2Q8IXW0 634 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ZBED8Q8IZ13 594 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 RBFAQ8N0V3 343 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 SLC22A18ASQ8N1D0 253 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 MPP5Q8N3R9 675 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 AVL9Q8NBF6 648 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 GALNT11Q8NCW6 608 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 FAM46DQ8NEK8 389 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 OR6C4Q8NGE1 309 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CDKL2Q92772 493 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ZNF669Q96BR6 464 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-212ENST00000539975 EID2BQ96D98 161 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 OR2M4Q96R27 311 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 TCF12Q99081 682 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 AGAP2Q99490 1192 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LRRC1Q9BTT6 524 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 KIFC1Q9BW19 673 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 LGR4Q9BXB1 951 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 CLPBQ9H078 707 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 ABCG4Q9H172 646 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 OR2AG1Q9H205 316 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 OSGEPL1Q9H4B0 414 aa6.39□□□□□ -1.39
SNHG1-212ENST00000539975 AKTIPQ9H8T0 292 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms