RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CA12O43570 354 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 TRIM16O95361 564 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 GALTP07902 379 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 IL10P22301 178 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CLCN2P51788 898 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ZNF177Q13360 481 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-210ENST00000539599 NR6A1Q15406 480 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 GTDC1Q4AE62 458 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 LRRC73Q5JTD7 316 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ARMC12Q5T9G4 340 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ARHGAP22Q7Z5H3 698 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 AUTS2Q8WXX7 1259 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 DUS3LQ96G46 650 aaKnown RBP13.88□□□□□ -0.19
UBE3B-210ENST00000539599 C17orf80Q9BSJ5 609 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 GID8Q9NWU2 228 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 OR6C75A6NL08 312 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 OR7A17O14581 309 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 UROSP10746 265 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 SLC11A2P49281 568 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 GALK1P51570 392 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CDH4P55283 916 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 PHKG1Q16816 387 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ALG1LQ6GMV1 187 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 GOLGA7Q7Z5G4 137 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 SLC22A15Q8IZD6 547 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 TTC30BQ8N4P2 665 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 TBCDQ9BTW9 1192 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CLK4Q9HAZ1 481 aaKnown RBP13.88□□□□□ -0.19
UBE3B-210ENST00000539599 PREBQ9HCU5 417 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 TMEM161AQ9NX61 479 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 RSL24D1Q9UHA3 163 aaKnown RBP13.88□□□□□ -0.19
UBE3B-210ENST00000539599 DFNA5O60443 496 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ELK4P28324 431 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CLCN7P51798 805 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ATP6AP1Q15904 470 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ATP6AP1LQ52LC2 224 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 FRA10AC1Q70Z53 315 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 RNF180Q86T96 592 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 DTWD1Q8N5C7 304 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 KRTCAP2Q8N6L1 136 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 PCSK9Q8NBP7 692 aaKnown RBP13.88□□□□□ -0.19
UBE3B-210ENST00000539599 ZUFSPQ96AP4 578 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 POPDC3Q9HBV1 291 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CLEC4EQ9ULY5 219 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 XIRP2A4UGR9 3374 aa13.88□□□□□ -0.19
UBE3B-210ENST00000539599 CHD7Q9P2D1 2997 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 A0A1W2PQ45 241 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 A0A1W2PQY0 241 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 GIPC1O14908 333 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 TBL1XO60907 577 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 ALDH3B2P48448 385 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 RPL38P63173 70 aaKnown RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 LRRC8DQ7L1W4 858 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 MILR1Q7Z6M3 343 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 TRPV3Q8NET8 790 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 OR56A4Q8NGH8 313 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 EZH1Q92800 747 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 CHID1Q9BWS9 393 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 GPR63Q9BZJ6 419 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 STARD7Q9NQZ5 370 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 NDUFA13Q9P0J0 144 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 ZNHIT2Q9UHR6 403 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 PIKFYVEQ9Y2I7 2098 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 AQP12BA6NM10 295 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 SYCE1LA8MT33 242 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 CLOCKO15516 846 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 TBC1D4O60343 1298 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 AOC2O75106 756 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 PYGLP06737 847 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 RFC2P35250 354 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 NEDD8Q15843 81 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 FAM117BQ6P1L5 589 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 ITIH5Q86UX2 942 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 AQP12AQ8IXF9 295 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 C10orf111Q8N326 155 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 NKAPQ8N5F7 415 aaKnown RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 FBXO30Q8TB52 745 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 AURKBQ96GD4 344 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 CENPNQ96H22 339 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-210ENST00000539599 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 TNKS2Q9H2K2 1166 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 SLC6A13Q9NSD5 602 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 NEUROG3Q9Y4Z2 214 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 FADS3Q9Y5Q0 445 aa13.87□□□□□ -0.19
UBE3B-210ENST00000539599 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 UPK3BL1B0FP48 263 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 UPK3BL2E5RIL1 263 aa13.86□□□□□ -0.19
UBE3B-210ENST00000539599 EEDO75530 441 aaKnown RBP13.86□□□□□ -0.19
UBE3B-210ENST00000539599 HMGA1P17096 107 aaKnown RBP13.86□□□□□ -0.19
UBE3B-210ENST00000539599 NFKBIAP25963 317 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms