RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CCR10P46092 362 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CCT3P49368 545 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DLG2Q15700 870 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SERPINA9Q86WD7 417 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TTC29Q8NA56 475 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FLCNQ8NFG4 579 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ACAT2Q9BWD1 397 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MCUBQ9NWR8 336 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 UBAP1Q9NZ09 502 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 IGSF9Q9P2J2 1179 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GTF2IRD1Q9UHL9 959 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CDH22Q9UJ99 828 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RBM7Q9Y580 266 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FAM92AA1XBS5 289 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PMM2O15305 246 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RGS10O43665 173 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CBFA2T3O75081 653 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 OR5F1O95221 314 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DHFRP00374 187 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CBX5P45973 191 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 HSPA7P48741 367 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 DSC2Q02487 901 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CYP1B1Q16678 543 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TMEM44Q2T9K0 475 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FAAH2Q6GMR7 532 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 BORCS5Q969J3 196 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MCMBPQ9BTE3 642 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CNPPD1Q9BV87 410 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RAB11FIP5Q9BXF6 653 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 IL1RAPQ9NPH3 570 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CHRAC1Q9NRG0 131 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 COPS7AQ9UBW8 275 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 GLTPD2A6NH11 291 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 LRRC72A6NJI9 287 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ADAMDEC1O15204 470 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SLC7A4O43246 635 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SIN3BO75182 1162 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ENTPD5O75356 428 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 FAM155BO75949 473 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 MATN4O95460 622 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SLC35G6P0C7Q6 338 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SP100P23497 879 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ITPKAP23677 461 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 AKT2P31751 481 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 RAPSNQ13702 412 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 IL23RQ5VWK5 629 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 CLNKQ7Z7G1 428 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 IRF2BP1Q8IU81 584 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PDPRQ8NCN5 879 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ALG2Q9H553 416 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 IPPKQ9H8X2 491 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 TRMT13Q9NUP7 481 aaKnown RBP6.42□□□□□ -1.38
LSAMP-207ENST00000539563 ARL8BQ9NVJ2 186 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 PCDHGA11Q9Y5H2 935 aa6.42□□□□□ -1.38
LSAMP-207ENST00000539563 SCN2BO60939 215 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LYPLA1O75608 230 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ATP5A1P25705 553 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PSMA1P25786 263 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LCP2Q13094 533 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CAMK1Q14012 370 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LRRN4Q8WUT4 740 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TBATAQ96M53 351 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 WRAP53Q9BUR4 548 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CHID1Q9BWS9 393 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 EQTNQ9NQ60 294 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 WBP11Q9Y2W2 641 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 FADS3Q9Y5Q0 445 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GPC6Q9Y625 555 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TLL2Q9Y6L7 1015 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SAGE2PA6NJ88 616 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LOC110117498-PIK3R3F6TDL0 507 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 MTRF1O75570 445 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 EPHX1P07099 455 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GIMD1P0DJR0 217 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SAGP10523 405 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TFPIP10646 304 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 NMBRP28336 390 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SDC2P34741 201 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SCNN1AP37088 669 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 MNDAP41218 407 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 BLKP51451 505 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 RPS6KA3P51812 740 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 CCNIQ14094 377 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 QPCTQ16769 361 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TPGS2Q68CL5 300 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 FAM124AQ86V42 546 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 RANBP3LQ86VV4 465 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SPPL2CQ8IUH8 684 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 KCTD13Q8WZ19 329 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DNASE1L2Q92874 299 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 LENG1Q96BZ8 264 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TSSK3Q96PN8 268 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 PDP1Q9P0J1 537 aaPredicted RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 GNEQ9Y223 722 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 RUVBL1Q9Y265 456 aaKnown RBP6.41□□□□□ -1.38
LSAMP-207ENST00000539563 SLC45A1Q9Y2W3 748 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 DHRS7Q9Y394 339 aa6.41□□□□□ -1.38
LSAMP-207ENST00000539563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms