RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 IDUAP35475 653 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 AGTR2P50052 363 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CCT8P50990 548 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 MTPNP58546 118 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 RPS24P62847 133 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 TRAP1Q12931 704 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 ZNF235Q14590 738 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 TYSND1Q2T9J0 566 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 C6orf183Q5T699 404 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 KANK2Q63ZY3 851 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 HPS1Q92902 700 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CENPNQ96H22 339 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 KCTD14Q9BQ13 255 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CHID1Q9BWS9 393 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 TLR8Q9NR97 1041 aaKnown RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 MARCH5Q9NX47 278 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 SMPD3Q9NY59 655 aaPredicted RBP12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
SFSWAP-208ENST00000539506 CDC7O00311 574 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 BMP1P13497 986 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ATF6P18850 670 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 TGFBR1P36897 503 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ACADVLP49748 655 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ZNF140P52738 457 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 OR4D2P58180 307 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 CREB5Q02930 508 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ZNF362Q5T0B9 420 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 TAMM41Q96BW9 452 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 PKD2L2Q9NZM6 624 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 POLG2Q9UHN1 485 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 AZIN1O14977 448 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 GPR39O43194 453 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 OR1I1O60431 355 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 CBFA2T3O75081 653 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ZDHHC11BP0C7U3 371 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 NFKBIAP25963 317 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 CAPGP40121 348 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ACLYP53396 1101 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 FCGRTP55899 365 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 MTA1Q13330 715 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 TSNQ15631 228 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ALG1LQ6GMV1 187 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 MRNIPQ6NTE8 343 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 UGT3A1Q6NUS8 523 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 R3HCC1LQ7Z5L2 792 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 DSG4Q86SJ6 1040 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 PIANPQ8IYJ0 282 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 AFAP1L2Q8N4X5 818 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 FAM86B1Q8N7N1 296 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 Q8N9G6 341 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 OR4K2Q8NGD2 314 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ALG2Q9H553 416 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 PNMA8BQ9ULN7 279 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 UBA6A0AVT1 1052 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 A6NL46 340 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 SYN3O14994 580 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ADAM12O43184 909 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 GJB5O95377 273 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 EPOP01588 193 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 ALBP02768 609 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 HOXD12P35452 270 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 YBEYP58557 167 aaPredicted RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 GPNMBQ14956 572 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 RGS21Q2M5E4 152 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 SLC2A7Q6PXP3 512 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 MIER2Q8N344 545 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 RHEBL1Q8TAI7 183 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 FBXO30Q8TB52 745 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 SEPT8Q92599 483 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 GFM2Q969S9 779 aaKnown RBP12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 MGME1Q9BQP7 344 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 C9orf16Q9BUW7 83 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
SFSWAP-208ENST00000539506 KRBA1A5PL33 1030 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ECI2O75521 394 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 CST5P28325 142 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ZFP36L2P47974 494 aaKnown RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 MAPKAPK2P49137 400 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ATP4BP51164 291 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 OXCT1P55809 520 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 AQP6Q13520 282 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 DGCR6Q14129 220 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 SELPLGQ14242 412 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 ATP6AP1Q15904 470 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 DHRS4L2Q6PKH6 230 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TRPV3Q8NET8 790 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 BCL7CQ8WUZ0 217 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 BIRC7Q96CA5 298 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 CCDC138Q96M89 665 aa12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 UHRF1Q96T88 793 aaPredicted RBP12.41□□□□□ -0.42
SFSWAP-208ENST00000539506 TBCDQ9BTW9 1192 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms