RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MTBPQ96DY7 904 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 HIST1H2AHQ96KK5 128 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 TEFMQ96QE5 360 aaKnown RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 LGMNQ99538 433 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 EBNA1BP2Q99848 306 aaKnown RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 HIST1H2AJQ99878 128 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 H2AFJQ9BTM1 129 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 DRC3Q9H069 523 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 OCEL1Q9H607 264 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 ASB8Q9H765 288 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 POPDC3Q9HBV1 291 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 EPB41L5Q9HCM4 733 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 POT1Q9NUX5 634 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 SENP1Q9P0U3 644 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 APOBEC3BQ9UH17 382 aaKnown RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 EIF2B4Q9UI10 523 aaKnown RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CDH22Q9UJ99 828 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF180Q9UJW8 692 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 CHKBQ9Y259 395 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 PCDHB11Q9Y5F2 797 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 SNX10Q9Y5X0 201 aa3.54□□□□□ -1.84
PTPN22-211ENST00000538253 KIF26AQ9ULI4 1882 aaPredicted RBP3.54□□□□□ -1.84
PTPN22-211ENST00000538253 LMO7DNF2Z398 122 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SCAMP3O14828 347 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 PCDH17O14917 1159 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 TOX3O15405 576 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SLC31A1O15431 190 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 KRT37O76014 449 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CDK14O94921 469 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ENO2P09104 434 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 MTHFD1P11586 935 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 RAC2P15153 192 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 JUNDP17535 347 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CYP2A7P20853 494 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 GSTM2P28161 218 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 EPHA8P29322 1005 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SLC26A3P40879 764 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SGSHP51688 502 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SRP54P61011 504 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 NHLH1Q02575 133 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 TRAF2Q12933 501 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 GNA13Q14344 377 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 BRD3Q15059 726 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 INSCQ1MX18 579 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 YOD1Q5VVQ6 348 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 FAM45BPQ6NSW5 357 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 RAB44Q7Z6P3 723 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 TAF8Q7Z7C8 310 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 EXOC3L1Q86VI1 746 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 AMZ2Q86W34 360 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SLC44A2Q8IWA5 706 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 NPWQ8N729 165 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CHST14Q8NCH0 376 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 GPR150Q8NGU9 434 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 OR4L1Q8NH43 312 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 FAM45AQ8TCE6 357 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 WFDC5Q8TCV5 224 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 C1orf54Q8WWF1 131 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ALG3Q92685 438 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ERLEC1Q96DZ1 483 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CFAP36Q96G28 342 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 AHCYL2Q96HN2 611 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 C16orf45Q96MC5 204 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 FCRL4Q96PJ5 515 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 RBM15Q96T37 977 aaKnown RBP eCLIP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CYTH2Q99418 400 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 TEX101Q9BY14 249 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ARRDC1-AS1Q9H2J1 176 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 DPEP2Q9H4A9 486 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ANKMY1Q9P2S6 941 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ATXN10Q9UBB4 475 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 FETUBQ9UGM5 382 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ATPIF1Q9UII2 106 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 NEU3Q9UQ49 428 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 ANKRD6Q9Y2G4 727 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SPTY2D1-AS1A0A0U1RR47 76 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 IQANK1A0A1B0GTG1 560 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 FAM86C2PA6NEL3 165 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 MGAT4DA6NG13 374 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 IGLON5A6NGN9 336 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 LILRA5A6NI73 299 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 TRAFD1O14545 582 aaPredicted RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 HDAC3O15379 428 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 AQP9O43315 295 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 GRID2O43424 1007 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SMAD6O43541 496 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 DUX1O43812 170 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 PIP5K1CO60331 668 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 MMP20O60882 483 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SMIM24O75264 130 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 IPO13O94829 963 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 VIPP01282 170 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 MT-ND3P03897 115 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CSF2P04141 144 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 PRKACBP22694 351 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CXCR2P25025 360 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 CRABP2P29373 138 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 SERPINB1P30740 379 aa3.53□□□□□ -1.84
PTPN22-211ENST00000538253 RPL22P35268 128 aaKnown RBP3.53□□□□□ -1.84
PTPN22-211ENST00000538253 TRIM23P36406 574 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms